Transcript Information: S_Transcript_419420.p1


Annotated TAIR IDAT3G08670.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast hits to 29827 proteins in 1356 species: Archae - 46; Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants - 2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2633946-2636536 | Forward length=567
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78562365269905
Replicate 20.81412507592306
Replicate 30.61248939023028
Condition 2: 8 Hour
Replicate 10.94429772621991
Replicate 20.99063536412074
Replicate 30.78656264225023
Condition 3: 24 Hour
Replicate 10.56425898315188
Replicate 20.50178180611839
Replicate 30.65149192190337


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_419420.p1 GENE.S_Transcript_419420~~S_Transcript_419420.p1 ORF type:internal len:271 (+),score=42.55 S_Transcript_419420:3-812(+)
GAAATGGGGCAACATCCAACCTTTGATAGATATGAAGCGGCAGCACCTTGGAAAGGAAAAAGTAAGATTCAAGGCAGTGAATCTGTAAAACAATCTCTGAAGTTGCAAGGAAACAAACTGGAAGCTACCGATCAAGATTCCTTTAAAAGAGAGAGATCTGGAGTCCCGACCATGCCGCTAGATCAATCACAACATAGCTGCTCTGTAGCAGCAACCTCTGATTTTAAAGCGAATGCTCAGTTGTCTGCCAAGCCAGCCCGGAAGATCACTCCAGGCATAAACAATTGCGAGGATACTCTGTCTTCTAGAATTGATAGCAACAAGCACTCGGAGGCAGCTGGTCCTAGTTCGCATAATCCACAATGTATCCTAAATTCATCTCGTGCATCACATATATCCGCTCATTCAACCAAGATGTTTCACAGTCCATCCAGGACCAGGGGTGCTCAGGTTGTCAGAGATCACTATCCAGCATCCCATATGCTATCCTTTCCTGCTAGGATGCTTAGTAGCCCCTCTAGGAGCATAAACACAGAGGAGAAGCAGGTGAGTACTGCGATTAGGAGTATAAGTGCAGCCAAGCCTTGTGAGGAGTTGGATGTGAGAAAAAGCTGTGAGTCTGTGCCCAAAGCAAGAAACCCATCATCGATTCGTAGATTGAGTTTCACAATGGGCAAGATGATGAAGAATGCCAGCTCCAGGGACAACTCGCCCCTTCGTAGGTCAAGTTCAAAAGATTGCATTGCCAAATCTGGGTCTGAGGGGACTACTGGCGTGTCATCCATTGATAATCCTTGCAACGATAAGTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_419420.p1 GENE.S_Transcript_419420~~S_Transcript_419420.p1 ORF type:internal len:271 (+),score=42.55 S_Transcript_419420:3-812(+)
EMGQHPTFDRYEAAAPWKGKSKIQGSESVKQSLKLQGNKLEATDQDSFKRERSGVPTMPLDQSQHSCSVAATSDFKANAQLSAKPARKITPGINNCEDTLSSRIDSNKHSEAAGPSSHNPQCILNSSRASHISAHSTKMFHSPSRTRGAQVVRDHYPASHMLSFPARMLSSPSRSINTEEKQVSTAIRSISAAKPCEELDVRKSCESVPKARNPSSIRRLSFTMGKMMKNASSRDNSPLRRSSSKDCIAKSGSEGTTGVSSIDNPCNDKS

Click here to download the sequence:
Link to NCBI Protein BLAST