Transcript Information: S_Transcript_419682.p1


Annotated TAIR IDAT5G12180.1
Annotated Gene Namecalcium-dependent protein kinase 17
Annotated Gene Symbol(s)CPK17
Annotation TypeHomolog
Chromosome Positionchr5:3937136-3939323 | Forward length=528
E-Value7E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.32637262659046
Replicate 30.054564307939647
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.60347427274298
Replicate 30.29848573260492


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_419682.p1 GENE.S_Transcript_419682~~S_Transcript_419682.p1 ORF type:internal len:338 (+),score=10.07,Pkinase|PF00069.21|9.3e-48,EF-hand_1|PF00036.28|1.5e-05,EF-hand_1|PF00036.28|8.3e-06,EF-hand_1|PF00036.28|4.6e-05,EF-hand_6|PF13405.2|4.3e-07,EF-hand_6|PF13405.2|0.011,EF-hand_6|PF13405.2|3e-06,EF-hand_7|PF13499.2|8.4e-14,EF-hand_7|PF13499.2|0.0012,EF-hand_5|PF13202.2|8e-05,EF-hand_5|PF13202.2|0.00038,EF-hand_5|PF13202.2|9.2e-06,EF-hand_8|PF13833.2|0.31,EF-hand_8|PF13833.2|3e-09,EF-hand_8|PF13833.2|0.028,Pkinase_Tyr|PF07714.13|2.1e-14 S_Transcript_419682:3-1013(+)
GTTGGCGGCGAGCTCTTTGACTCCATTGTCGAGGCGGGCTCATACACAGAGGCAAAGGCGGCAGCATGCTTCCGTAAGATGGTGGACATGCTGCACCATTGTCACGAACTTGGTGTCATGCATCGTGACTTGAAACCAGAGAATTTCCTGCTCACCAGCAAGAGCAAAGACAAGGCCGAGATCAAGGCCACCGACTTTGGCCTCTCCATCTTCTTCAAGCCGCGCGAGCGCTTCAGCGAGCTCGTGGGCTCGCCGTACTACGTGGCGCCTGAAGTGCTGAAGAAGAACTACTCGTTCGAGGCGGACCTGTGGTCGCTAGGCGTCATCCTGTACATCCTGTTGAGCGGCCTGCCGCCGTTTTGGGGCGACACGGAGGAGCAGATCTTCAAGATGGTGCTCAAAGGCAAGGTTGACTTTGAGACGGAGCCGTGGCCAAAGGTCAGCAGCGCAGCGAAGGACCTCGTCAAGCAGCTGCTCACCATGGACGCCACCAAGAGGGCGACGTGCGCCGACATCTTGAGGCACCCGTGGCTGAAGCAGACCGGCCACGGCATGGACAAGCCGCTCGACAACGTCGTGCTCAGCCGCATGAAGAACTTTGCGGCGATGAACAAGATGAAGAAGACCGCGCTCATGGTCGTCGGCAGCTGCCTCAGCTCGGACGAGATCGCGGGCATGAAGCGGCTCTTCAAGAGCATCGACACCGACGGCTCCGGCACCATCACCGTCAAGGAGCTGCAGGACGCGATCAAGCAGTGGGGCCACAAGATCCCGAGCGAGGAGGTGATGGCGGTGATGAAGGCGGCTGACGTCGACGGCGACGGCGTGATCGACTACAACGAGTTTGTCGCCGCCACGCTCAACGTGAACCAGCTCGAGAAGGAGGAGCTCATCGCGAAGGCGTTCAAGCAGTTTGACACCGACGGCAGCAACTCCATCTCGATGGACGAGCTCGCGCAGGCGCTCGCAAAGTTTGGTGTGACGGACAACGTTGGCGACTTGCTGAAGGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_419682.p1 GENE.S_Transcript_419682~~S_Transcript_419682.p1 ORF type:internal len:338 (+),score=10.07,Pkinase|PF00069.21|9.3e-48,EF-hand_1|PF00036.28|1.5e-05,EF-hand_1|PF00036.28|8.3e-06,EF-hand_1|PF00036.28|4.6e-05,EF-hand_6|PF13405.2|4.3e-07,EF-hand_6|PF13405.2|0.011,EF-hand_6|PF13405.2|3e-06,EF-hand_7|PF13499.2|8.4e-14,EF-hand_7|PF13499.2|0.0012,EF-hand_5|PF13202.2|8e-05,EF-hand_5|PF13202.2|0.00038,EF-hand_5|PF13202.2|9.2e-06,EF-hand_8|PF13833.2|0.31,EF-hand_8|PF13833.2|3e-09,EF-hand_8|PF13833.2|0.028,Pkinase_Tyr|PF07714.13|2.1e-14 S_Transcript_419682:3-1013(+)
VGGELFDSIVEAGSYTEAKAAACFRKMVDMLHHCHELGVMHRDLKPENFLLTSKSKDKAEIKATDFGLSIFFKPRERFSELVGSPYYVAPEVLKKNYSFEADLWSLGVILYILLSGLPPFWGDTEEQIFKMVLKGKVDFETEPWPKVSSAAKDLVKQLLTMDATKRATCADILRHPWLKQTGHGMDKPLDNVVLSRMKNFAAMNKMKKTALMVVGSCLSSDEIAGMKRLFKSIDTDGSGTITVKELQDAIKQWGHKIPSEEVMAVMKAADVDGDGVIDYNEFVAATLNVNQLEKEELIAKAFKQFDTDGSNSISMDELAQALAKFGVTDNVGDLLKA

Click here to download the sequence:
Link to NCBI Protein BLAST