Transcript Information: S_Transcript_42003.p1


Annotated TAIR IDAT5G53460.1
Annotated Gene NameNADH-dependent glutamate synthase 1
Annotated Gene Symbol(s)GLT1
Annotation TypeOrtholog
Chromosome Positionchr5:21700518-21709629 | Forward length=2208
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.604071307326
Replicate 22.3573939527208
Replicate 32.96431191846
Condition 2: 8 Hour
Replicate 11.7332965645889
Replicate 22.5130021759693
Replicate 31.7714540018752
Condition 3: 24 Hour
Replicate 11.6159228883453
Replicate 21.7385937647609
Replicate 32.7179919998207


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42003.p1 GENE.S_Transcript_42003~~S_Transcript_42003.p1 ORF type:3prime_partial len:1095 (+),score=235.53,GATase_2|PF00310.17|1.6e-184,Glu_syn_central|PF04898.10|5.1e-115,Glu_synthase|PF01645.13|4.9e+03,Glu_synthase|PF01645.13|6.6e+03,Glu_synthase|PF01645.13|9.8e-46 S_Transcript_42003:645-3926(+)
ATGTCGTCCACGGCGGGAGGAATCGGCTCCGTGCTGCAGCTCCGGAGCAAGACCGGTTCACCCAGTCTCAACCGGACGGTAAACCCGGTCGGCGTGGCGGTACCTTTGCCGCTTTGTCGGTTCGGGAAGAGATCGTCAAGGAGCTATTCCGTCAGGAGATGGTCCCACCCAAGTTCCACCGAGAACAAGACTAGTTTGTTCGGAAAACGGGTGGTCGGATCCGAGAAGAGGCTCCATCTGCTGAACCCGGATCCGAAACTGAGAACGGTGGTTCGATCCGCATTCTCACAAGTACCGGAAAAGCCCTTGGGTCTGTACGACCCGGCGAATGATAAGGACTCTTGTGGTGTTGGGTTCGTCGCTGAACTCTCCGGTCAAAGCAGCCGTCAAACGGTGAATGATGCGGTGGAGATGTTGGTGAGGATGTCGCACAGAGGGGCGTGTGGTTGTGAGACAAATACTGGTGATGGTGCTGGTATTCTTGTTGGTCTTCCTCATGATTTCTTCTCTGAGGTGGCAAAGGATCTAGGGTTTGTGTTACCAGAGCCAGGAGAATATGCAGTTGGAATGTTTTTCTTGCCTACTTCTGAGGGCAGAAGGGAGGAAAGCAAAAATGTCTTCACTAAGGTTGCAGAGTCACTTGGGCATACTGTCCTTGGATGGCGCTCTGTTCCCACCGACAACTCGGGGTTGGGGAAGTCTGCTCTGCAGACTGAACCTGTGGTTGAACAGGTGTTTCTTACACCATCACCTCGCTCAAAAGCCGACTTTGAGCAACAGATGTACATATTAAGAAGGGTGTCGATGGTAGCCATCAGAGCTGCTTTGAACCTTCAACATGGTGCTGTTAAGGACTTCTATATATGTTCCCTGTCCACAAGGACTGTTGTCTACAAGGGTCAGTTGAAGCCTTCTCAACTGAAAGAGTACTACTTTTGGGACCTTGGGAATGAAAGGTTTACGAGCTACATGGCCCTGGTACACTCTCGATTCTCCACAAACACATTTCCCAGCTGGGATCGTGCTCAGCCCATGCGTGTTTTGGGCCATAATGGAGAGATCAACACCCTTCGTGGCAATGTAAATTGGATGCGTGCCCGTGAAGGTCTACTTAAGTGCAGGGAACTTGGATTGTCAAAGAATGAAATGAAGAAGCTCTTGCCTATAGTGGACGCTAGCTCTTCTGATTCAGGAGCGTTTGATGGTGTTCTTGAGCTCTTGATTCGAGCTGGTAGAAGTCTCCCCGAAGCAGTCATGATGATGATCCCTGAAGCATGGCAAAATGATAAGAATATGGATCCTCAGCGAAGGTCCTTCTATGAGTATTTCTCAGCCCTAATGGAACCTTGGGATGGCCCTGCTCTTATAACATTCACTGATGGTCGTTACCTTGGAGCCACATTGGATAGGAATGGTCTGCGCCCAGGACGTTTCTACATAACACACAGTGGAAGAGTAATTATGGCGAGTGAGGTTGGTGTCGTAGATATCCCACCAGAAGATGTATCCAAGAAGGGGCGTCTCAATCCTGGAATGATGCTTTTGGTGGATTTTGACAAACACATTGTTGTAGATGACGAGGCCCTGAAGAAGCAGTATTCACTTGCCATGCCTTATGGTGATTGGCTAAAAAGGCAGAAGTTAGTATTGAAGGACATAGTCAATTCTGTTTCTGAAGCAGAGAGGATTGCTCCCCCAATATCCGGTTCAGCGCCTGTTTCTAATCAAGATGAAGACATGGAGAACATGGGCATTCATGGTTTACTAGCACCATTGAAGGCCTTTGGGTACACGACTGAAGCCTTGGAAATGCTTTTGCTCCCCATGGCCAAAGATGGTACAGAGTCCCTTGGTTCCATGGGAAATGATACCCCCTTGGCTGTGATGTCAAACAGAGAAAAACTCACTTTTGAGTACTTCAAGCAGATGTTTGCTCAGGTTACAAACCCTCCTATTGATCCGATCAGGGAGAAGATTGTGACCTCTACGGAGTGTATGATTGGTCCAGAAGGTGATCTCACAGAAACAACCGAGGAGCAATGTCATCGTCTCTCATTAAAGGGTCCTCTTTTATCTATTGAGGAAATGGAAGCAATCAAGAAGATGGACTATAGGGGCTGGCGTAGCAAAGTTATTGATATAACTTATCCCAAGACCCTTGGTAGGAAGGGCTTGGAGGAGACATTAGACAGGATTTGTGCTGAAGCGAGGGAAGCAATAAAGGAGGGTTTCACCATTCTGGTGCTTTCTGACAGAGCTTTCTCACCAAGCCGTGTTGCTGTTAGCTCTCTGTTGGCTGTCGGTGCTGTTCATCAGCATTTAGTTAAGACACTCGAGCGTACTCGTGTTGGGCTTATAGTTGAATGTGCTGAACCACGTGAAGTGCACCACTTCTGTACTCTCGTTGGCTTTGGTGTTGATGCTATATGTCCTTATTTAGCCATTGAAGCTATTTGGAGATTGCAAGTTGATGGGAAGGTCCCACCCAAATCAAATGGGGAGTTTCACTCGAAAGAAGAGCTGATCAAAAAGTATTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTTGCTAAGATGGGAATTTCAACTTTGGCGTCTTACAAGGGTGCTCAGATCTTTGAAGCTGTGGGTCTTTCTTCGGATGTCATTGGGAGGTGTTTCACTGGAACTGCAAGCAGAGTCGAAGGTGCAACTTTTGAAGCACTTGCTTTTGATGCACTTAGACTTCATGAGATGGCATTTCCCAAGCGGGCCCTTCCAGAAGGAAGTGCTGAATCAATGGCACTGCCTAATCCAGGGGACTATCATTGGAGAAAAGGTGGTGAGCTTCACCTCAATGACCCCCTTGCTATAGCCAAGTTGCAAGAGGCTGCTAAATCTAACAGTGTCGCAGCATACAAAGAGTATTCAAATCGTATAAATGAATTGAATAAATCATGCAACTTGAGAGGGCTTTTGAAGTTCAAGGAGGCAAGGGAGAAAGTTCCCTTGGATGAGGTAGAACCTGCAAGTGAGATTGTGAAACGGTTCTGCACTGGAGCTATGAGTTATGGATCAATCTCCCTTGAGGCGCACACAACTTTGGCTGTGGCTATGAACAAGCTTGGCGGCAAGTCTAACACTGGTGAGGGAGGTGAGAATCCTTCTCGTCTAGAACCTCTCCCAGATGGTTCCATGAATCCCAAGAGGAGTGCAATTAAGCAGGTGGCCAGTGGAAGATTTGGTGTTTCCAGTTATTACTTGACCAACGCTGATGAACTGCAGATAAAAATGGCTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42003.p1 GENE.S_Transcript_42003~~S_Transcript_42003.p1 ORF type:3prime_partial len:1095 (+),score=235.53,GATase_2|PF00310.17|1.6e-184,Glu_syn_central|PF04898.10|5.1e-115,Glu_synthase|PF01645.13|4.9e+03,Glu_synthase|PF01645.13|6.6e+03,Glu_synthase|PF01645.13|9.8e-46 S_Transcript_42003:645-3926(+)
MSSTAGGIGSVLQLRSKTGSPSLNRTVNPVGVAVPLPLCRFGKRSSRSYSVRRWSHPSSTENKTSLFGKRVVGSEKRLHLLNPDPKLRTVVRSAFSQVPEKPLGLYDPANDKDSCGVGFVAELSGQSSRQTVNDAVEMLVRMSHRGACGCETNTGDGAGILVGLPHDFFSEVAKDLGFVLPEPGEYAVGMFFLPTSEGRREESKNVFTKVAESLGHTVLGWRSVPTDNSGLGKSALQTEPVVEQVFLTPSPRSKADFEQQMYILRRVSMVAIRAALNLQHGAVKDFYICSLSTRTVVYKGQLKPSQLKEYYFWDLGNERFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMRAREGLLKCRELGLSKNEMKKLLPIVDASSSDSGAFDGVLELLIRAGRSLPEAVMMMIPEAWQNDKNMDPQRRSFYEYFSALMEPWDGPALITFTDGRYLGATLDRNGLRPGRFYITHSGRVIMASEVGVVDIPPEDVSKKGRLNPGMMLLVDFDKHIVVDDEALKKQYSLAMPYGDWLKRQKLVLKDIVNSVSEAERIAPPISGSAPVSNQDEDMENMGIHGLLAPLKAFGYTTEALEMLLLPMAKDGTESLGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSTECMIGPEGDLTETTEEQCHRLSLKGPLLSIEEMEAIKKMDYRGWRSKVIDITYPKTLGRKGLEETLDRICAEAREAIKEGFTILVLSDRAFSPSRVAVSSLLAVGAVHQHLVKTLERTRVGLIVECAEPREVHHFCTLVGFGVDAICPYLAIEAIWRLQVDGKVPPKSNGEFHSKEELIKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEAVGLSSDVIGRCFTGTASRVEGATFEALAFDALRLHEMAFPKRALPEGSAESMALPNPGDYHWRKGGELHLNDPLAIAKLQEAAKSNSVAAYKEYSNRINELNKSCNLRGLLKFKEAREKVPLDEVEPASEIVKRFCTGAMSYGSISLEAHTTLAVAMNKLGGKSNTGEGGENPSRLEPLPDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQ

Click here to download the sequence:
Link to NCBI Protein BLAST