Transcript Information: S_Transcript_42004.p1


Annotated TAIR IDAT5G53460.1
Annotated Gene NameNADH-dependent glutamate synthase 1
Annotated Gene Symbol(s)GLT1
Annotation TypeOrtholog
Chromosome Positionchr5:21700518-21709629 | Forward length=2208
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.647256906782
Replicate 243.986964730375
Replicate 336.0840338976
Condition 2: 8 Hour
Replicate 119.818098331367
Replicate 221.505085917559
Replicate 322.208657975871
Condition 3: 24 Hour
Replicate 123.000031779887
Replicate 225.404827531392
Replicate 322.818687294262


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42004.p1 GENE.S_Transcript_42004~~S_Transcript_42004.p1 ORF type:complete len:1910 (+),score=505.67,Glu_synthase|PF01645.13|2.3e-161,Glu_syn_central|PF04898.10|1.3e-114,Glu_syn_central|PF04898.10|8.7e+02,GATase_2|PF00310.17|8.2e-106,GXGXG|PF01493.15|7.7e-81,Pyr_redox_2|PF07992.10|7.8e-27,Fer4_20|PF14691.2|4.4e-21,NAD_binding_8|PF13450.2|1.7e-08,Pyr_redox|PF00070.23|8.5e-05,Pyr_redox|PF00070.23|12,Pyr_redox|PF00070.23|1.1e+04,Pyr_redox_3|PF13738.2|0.0053,Pyr_redox_3|PF13738.2|0.77,Amino_oxidase|PF01593.20|1.1e-05,FAD_oxidored|PF12831.3|1.5e-05 S_Transcript_42004:2031-7760(+)
ATGGAGTACGGGATCTTTTTCACTGAAATTGCTGGGATGTCTTTGCTTCAGGTACACTCTCGATTCTCCACAAACACATTTCCCAGCTGGGATCGTGCTCAGCCCATGCGTGTTTTGGGCCATAATGGAGAGATCAACACCCTTCGTGGCAATGTAAATTGGATGCGTGCCCGTGAAGGTCTACTTAAGTGCAGGGAACTTGGATTGTCAAAGAATGAAATGAAGAAGCTCTTGCCTATAGTGGACGCTAGCTCTTCTGATTCAGGAGCGTTTGATGGTGTTCTTGAGCTCTTGATTCGAGCTGGTAGAAGTCTCCCCGAAGCAGTCATGATGATGATCCCTGAAGCATGGCAAAATGATAAGAATATGGATCCTCAGCGAAGGTCCTTCTATGAGTATTTCTCAGCCCTAATGGAACCTTGGGATGGCCCTGCTCTTATAACATTCACTGATGGTCGTTACCTTGGAGCCACATTGGATAGGAATGGTCTGCGCCCAGGACGTTTCTACATAACACACAGTGGAAGAGTAATTATGGCGAGTGAGGTTGGTGTCGTAGATATCCCACCAGAAGATGTATCCAAGAAGGGGCGTCTCAATCCTGGAATGATGCTTTTGGTGGATTTTGACAAACACATTGTTGTAGATGACGAGGCCCTGAAGAAGCAGTATTCACTTGCCATGCCTTATGGTGATTGGCTAAAAAGGCAGAAGTTAGTATTGAAGGACATAGTCAATTCTGTTTCTGAAGCAGAGAGGATTGCTCCCCCAATATCCGGTTCAGCGCCTGTTTCTAATCAAGATGAAGACATGGAGAACATGGGCATTCATGGTTTACTAGCACCATTGAAGGCCTTTGGGTACACGACTGAAGCCTTGGAAATGCTTTTGCTCCCCATGGCCAAAGATGGTACAGAGTCCCTTGGTTCCATGGGAAATGATACCCCCTTGGCTGTGATGTCAAACAGAGAAAAACTCACTTTTGAGTACTTCAAGCAGATGTTTGCTCAGGTTACAAACCCTCCTATTGATCCGATCAGGGAGAAGATTGTGACCTCTACGGAGTGTATGATTGGTCCAGAAGGTGATCTCACAGAAACAACCGAGGAGCAATGTCATCGTCTCTCATTAAAGGGTCCTCTTTTATCTATTGAGGAAATGGAAGCAATCAAGAAGATGGACTATAGGGGCTGGCGTAGCAAAGTTATTGATATAACTTATCCCAAGACCCTTGGTAGGAAGGGCTTGGAGGAGACATTAGACAGGATTTGTGCTGAAGCGAGGGAAGCAATAAAGGAGGGTTTCACCATTCTGGTGCTTTCTGACAGAGCTTTCTCACCAAGCCGTGTTGCTGTTAGCTCTCTGTTGGCTGTCGGTGCTGTTCATCAGCATTTAGTTAAGACACTCGAGCGTACTCGTGTTGGGCTTATAGTTGAATGTGCTGAACCACGTGAAGTGCACCACTTCTGTACTCTCGTTGGCTTTGGTGTTGATGCTATATGTCCTTATTTAGCCATTGAAGCTATTTGGAGATTGCAAGTTGATGGGAAGGTCCCACCCAAATCAAATGGGGAGTTTCACTCGAAAGAAGAGCTGATCAAAAAGTATTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTTGCTAAGATGGGAATTTCAACTTTGGCGTCTTACAAGGGTGCTCAGATCTTTGAAGCTGTGGGTCTTTCTTCGGATGTCATTGGGAGGTGTTTCACTGGAACTGCAAGCAGAGTCGAAGGTGCAACTTTTGAAGCACTTGCTTTTGATGCACTTAGACTTCATGAGATGGCATTTCCCAAGCGGGCCCTTCCAGAAGGAAGTGCTGAATCAATGGCACTGCCTAATCCAGGGGACTATCATTGGAGAAAAGGTGGTGAGCTTCACCTCAATGACCCCCTTGCTATAGCCAAGTTGCAAGAGGCTGCTAAATCTAACAGTGTCGCAGCATACAAAGAGTATTCAAATCGTATAAATGAATTGAATAAATCATGCAACTTGAGAGGGCTTTTGAAGTTCAAGGAGGCAAGGGAGAAAGTTCCCTTGGATGAGGTAGAACCTGCAAGTGAGATTGTGAAACGGTTCTGCACTGGAGCTATGAGTTATGGATCAATCTCCCTTGAGGCGCACACAACTTTGGCTGTGGCTATGAACAAGCTTGGCGGCAAGTCTAACACTGGTGAGGGAGGTGAGAATCCTTCTCGTCTAGAACCTCTCCCAGATGGTTCCATGAATCCCAAGAGGAGTGCAATTAAGCAGGTGGCCAGTGGAAGATTTGGTGTTTCCAGTTATTACTTGACCAACGCTGATGAACTGCAGATAAAAATGGCTCAGGGTGCAAAGCCTGGTGAAGGAGGTGAACTTCCTGGACATAAGGTCATTGGAGACATTGCTGTTACTAGAAACTCGACTGCTGGTGTTGGTCTTATAAGTCCTCCTCCCCATCATGACATCTACTCGATTGAGGACCTTGCCCAACTGATTCATGATTTGAAGAATGCCAATCCATCAGCCCGAGTCAGTGTTAAACTTGTTTCTGAAGCTGGAGTTGGAGTGATTGCTTCTGGGGTTGTCAAGGGCCATGCAGACCATGTTTTGATCTCTGGACATGATGGAGGAACTGGGGCTTCTCGATGGACTGGTATAAAGAATGCTGGGCTTCCTTGGGAGCTTGGACTTGCTGAGACCCATCAAACTCTAGTTGCAAATGACCTTCGTGGCCGTACAACCCTTCAAACTGATGGGCAACTCAAAACAGGAAGAGATGTGGCAATTGCTGCTCTTCTTGGAGCTGAAGAGTTTGGTTTCAGCACAGCACCCCTCATTACACTTGGATGTATTATGATGAGAAAGTGCCATAAGAATACTTGTCCAGTGGGCATTGCCACACAGGACCCAGTTCTTCGCGCTAAGTTTGCTGGTGAACCGGAGCATGTAATCAATTTCTTCTTTATGCTAGCAGAGGAGGTGAGGGAAATTATGTCTCAGCTTGGATTCAGGAAGCTTGATGACATGGTTGGTCGTTCTGATATGCTTGAGCTCGACGAAGACGTCACAAAGAGCAATGAGAAGCTGAAGAATATTGACCTTTCCCTCTTGCTTAGACCAGCTGCCAGTATCCGTCCAGGTGCTTCCCAGCGCTGTGTCCAAAAGCAGGATCATGGTTTGGACATGGCTTTAGATCGAGAACTGATTTCCCTTTCTAAAGCTGCATTGGAGAAGGCACTTCCTGTTTATATTGAAACACCCATACGCAATGTGAACCGTGCGGTAGGGACTATGCTCAGCCATGAGGTGACAAAGCGGTACCACTTGGATGGGCTACCGACTGATACCATCCACGTTAAATTTAATGGAAGTGCAGGGCAGAGTCTTGGAGCCTTTCTCTGCCCCGGTATCACCTTGGAGCTAGAAGGTGACAGCAATGACTATGTTGGGAAAGGACTATCAGGTGGAAAGATTGTTGTGTATCCTCCAAGAAGTAGCGGTTTTGATCCAAAAGATAATATAGTCATTGGTAATGTAGCTCTGTACGGAGCAATAAAAGGAGAAGCTTATTTTAATGGCATGGCTGCAGAAAGATTTTGTGTCCGTAATTCAGGGGCTAAGGCTGTTGTAGAAGGTGTTGGTGATCATGGATGTGAGTACATGACTGGGGGAACTGTAGTGGTGCTTGGAAAAACAGGTAGAAACTTTGCTGCTGGTATGAGTGGGGGTATTGCCCATGTTCTAGATTTAGATGGCAAATTCCATTCCCGTTGCAATCCTGAGCTTGTAGATCTTGACAAAGTTGAGGAAGAGGAAGATATCATGACCCTCAGGATGATGATTCAACAACATCAACGTCATACAAACAGCCAGCTAGCAAAGGAAGTCCTTGATGACTTTGACAATCTTCTACCTAAATTCATCAAGGTCTTCCCAAGAGATTATAAACGTGTCCTTGCAAGCATGAAAGCTGATGGGCCTACAAAGGAGGCTGCAGGAAGTCTGCCCAAAGATGCCAAAGAATCCGAGGAGAAGGATGAGGTTGAGGTTGTCGAGAAGGATGCTTTTGAAGAACTAAAGAAGATGGCAGCTGCAACATTGAAAGGGCAAGCTGACGAGGAAAAGCAGGAGGTTATTCCAGAGACGCAACGTCCTTCTCGAGTCCCTGATGCTCAAAAACATCGTGGTTTTGTTGCTTATGAGCGTGAAGGGATTCAATATCGGGACCCTAATGAGAGGATGAAGGACTGGAAAGAAGTGATGGATGAGTCAAGACCCGCTCCCTTGTTGAAGACACAATCTGCCCGCTGCATGGATTGTGGCACTCCATTTTGTCATCAGGAAAATTCGGGCTGTCCACTTGGAAACAAAATACCTGAGTTCAATGAATTAGTTTACCAAAACAGATGGCGTGAAGCTCTTGATCGCCTTCTAGAGACAAATAACTTCCCGGAGTTTACTGGTCGAGTTTGTCCTGCCCCTTGTGAGGGTTCCTGTGTTCTTGGCATTATTGAGAATCCTGTGTCTATCAAAACTATTGAGTGTGCCATCATAGACAAAGCTTTTGAGGAAGGATGGATGGTGCCACGGCTACCATTGAAAAGAACTGGGAAAAGAGTTGCTATAGTTGGAAGTGGTCCAGCTGGCTTGGCTGCAGCTGATCAGCTCAACAAAATGGGACACACTGTTACTGTTTATGAGCGTGCTGATAGAATTGGTGGGCTCATGATGTACGGAGTGCCCAACATGAAGGCTGATAAAGTTGATATTGTCCAAAGACGTGTCAACCTCATGGCTGAGGAAGGCGTTAATTTTTTGGTCAATGCAAATGTTGGCAAGGATCCACTTTACTCGGTTGATCGGCTGAAGGAAGAGAATGATGCCATTGTTTTGGCAATTGGTGCCACAAAGCCACGGGACCTTCCTATTGAAGGACGGAACTTGTCAGGAGTCCATTTTGCCATGGAATTTTTACATGCCAATACTAAGAGCTTACTAGATAGTAATCTACAAGATGGCAACTACATCTCTGCTAAAGGGAAGAAGGTTGTGGTCATAGGTGGAGGTGATACAGGTACAGATTGCATTGGTACATCTATCCGACATGGCTGTACTAATGTTGTCAACTTGGAGCTTCTTCCCGAGCCACCAAAGTCAAGAGCTCCAGGCAATCCTTGGCCACAGTGGCCTCGTGTCTTCCGTGTTGATTATGGGCACCAGGAGGCAACCACCAAGTTTGGCAAAGACCCAAGGACTTATGAGGTCCTTACAAAACGTTTCGTGGGAGACGAAAATGGGAATGTGAAAGGCATTGAAGTGGTCCGTGTCAAGTGGGAGAAAGATGCTACTGGCAAGTTCCAATTCAAGGAAATTGAAGGCTCACAGGAGTTTATAGAGGCAGATTTAGTTCTTTTGGCTATGGGTTTCCTTGGCCCTGAATCGAACATTGCTGAGAAGCTGGATATGGAGCGAGACAACCGATCCAACTTCAAGGCAGACTATGGACGATTTTCAACCAGTGTAGAAGGTGTGTTTGCTGCTGGTGACTGCAGGCGTGGTCAGTCTTTGGTGGTATGGGCCATCTCAGAGGGCCGGCAAGCTGCTTCCCAGGTTGATAGGTACCTTATGGGAGAAGAAAAAGAGGTTTCCGTCATCTCTCCAGCGGAAGAAGTCCTCGACAAGAGGCAGCAGGGCAGCAACAAAAGCACTGTCATGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42004.p1 GENE.S_Transcript_42004~~S_Transcript_42004.p1 ORF type:complete len:1910 (+),score=505.67,Glu_synthase|PF01645.13|2.3e-161,Glu_syn_central|PF04898.10|1.3e-114,Glu_syn_central|PF04898.10|8.7e+02,GATase_2|PF00310.17|8.2e-106,GXGXG|PF01493.15|7.7e-81,Pyr_redox_2|PF07992.10|7.8e-27,Fer4_20|PF14691.2|4.4e-21,NAD_binding_8|PF13450.2|1.7e-08,Pyr_redox|PF00070.23|8.5e-05,Pyr_redox|PF00070.23|12,Pyr_redox|PF00070.23|1.1e+04,Pyr_redox_3|PF13738.2|0.0053,Pyr_redox_3|PF13738.2|0.77,Amino_oxidase|PF01593.20|1.1e-05,FAD_oxidored|PF12831.3|1.5e-05 S_Transcript_42004:2031-7760(+)
MEYGIFFTEIAGMSLLQVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMRAREGLLKCRELGLSKNEMKKLLPIVDASSSDSGAFDGVLELLIRAGRSLPEAVMMMIPEAWQNDKNMDPQRRSFYEYFSALMEPWDGPALITFTDGRYLGATLDRNGLRPGRFYITHSGRVIMASEVGVVDIPPEDVSKKGRLNPGMMLLVDFDKHIVVDDEALKKQYSLAMPYGDWLKRQKLVLKDIVNSVSEAERIAPPISGSAPVSNQDEDMENMGIHGLLAPLKAFGYTTEALEMLLLPMAKDGTESLGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSTECMIGPEGDLTETTEEQCHRLSLKGPLLSIEEMEAIKKMDYRGWRSKVIDITYPKTLGRKGLEETLDRICAEAREAIKEGFTILVLSDRAFSPSRVAVSSLLAVGAVHQHLVKTLERTRVGLIVECAEPREVHHFCTLVGFGVDAICPYLAIEAIWRLQVDGKVPPKSNGEFHSKEELIKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEAVGLSSDVIGRCFTGTASRVEGATFEALAFDALRLHEMAFPKRALPEGSAESMALPNPGDYHWRKGGELHLNDPLAIAKLQEAAKSNSVAAYKEYSNRINELNKSCNLRGLLKFKEAREKVPLDEVEPASEIVKRFCTGAMSYGSISLEAHTTLAVAMNKLGGKSNTGEGGENPSRLEPLPDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPSARVSVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTTLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLRAKFAGEPEHVINFFFMLAEEVREIMSQLGFRKLDDMVGRSDMLELDEDVTKSNEKLKNIDLSLLLRPAASIRPGASQRCVQKQDHGLDMALDRELISLSKAALEKALPVYIETPIRNVNRAVGTMLSHEVTKRYHLDGLPTDTIHVKFNGSAGQSLGAFLCPGITLELEGDSNDYVGKGLSGGKIVVYPPRSSGFDPKDNIVIGNVALYGAIKGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAHVLDLDGKFHSRCNPELVDLDKVEEEEDIMTLRMMIQQHQRHTNSQLAKEVLDDFDNLLPKFIKVFPRDYKRVLASMKADGPTKEAAGSLPKDAKESEEKDEVEVVEKDAFEELKKMAAATLKGQADEEKQEVIPETQRPSRVPDAQKHRGFVAYEREGIQYRDPNERMKDWKEVMDESRPAPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWREALDRLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKTIECAIIDKAFEEGWMVPRLPLKRTGKRVAIVGSGPAGLAAADQLNKMGHTVTVYERADRIGGLMMYGVPNMKADKVDIVQRRVNLMAEEGVNFLVNANVGKDPLYSVDRLKEENDAIVLAIGATKPRDLPIEGRNLSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCTNVVNLELLPEPPKSRAPGNPWPQWPRVFRVDYGHQEATTKFGKDPRTYEVLTKRFVGDENGNVKGIEVVRVKWEKDATGKFQFKEIEGSQEFIEADLVLLAMGFLGPESNIAEKLDMERDNRSNFKADYGRFSTSVEGVFAAGDCRRGQSLVVWAISEGRQAASQVDRYLMGEEKEVSVISPAEEVLDKRQQGSNKSTVMK*

Click here to download the sequence:
Link to NCBI Protein BLAST