Transcript Information: S_Transcript_42018.p1


Annotated TAIR IDAT5G08330.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2680828-2681547 | Forward length=239
E-Value8.1E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.613001235181
Replicate 226.43016769518
Replicate 328.702688239324
Condition 2: 8 Hour
Replicate 127.948634408802
Replicate 227.716658894951
Replicate 321.02484627249
Condition 3: 24 Hour
Replicate 125.125343810001
Replicate 223.359969611116
Replicate 323.242156960346


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42018.p1 GENE.S_Transcript_42018~~S_Transcript_42018.p1 ORF type:complete len:293 (+),score=43.98,TCP|PF03634.9|4.2e-34,TCP|PF03634.9|2.8e+03 S_Transcript_42018:294-1172(+)
ATGTCGGCTACAGACGGCGCTGCTAACGGTGGCGGCGGCGGAGGAGGAGGAGCGATAATTGACCCACAACAACAACAAAGGCAGGCTGCGGGGACGGCGTTGGGGGTGTTGAAGAAAGCGCCGGCGAAAGACAGGCACAGCAAGGTGGACGGAAGAGGGAGGAGGATAAGGATGCCAATCATATGCGCGGCACGTGTGTTCCAGCTCACTCGTGAATTGGGTCACAAATCCGATGGCCAAACCATCGAGTGGCTCTTACGTCAGGCTGAGCCTTCTATTATTGCTGCTACTGGTACTGGCACTACCCCTGCTTCTTTCTCCACCTCTCTCTCCTCCACTGCCTCTCACCACCACCACCACCAACACCACCACCACCACCTACTCCACCGCTCCGCCGCGTCATCTGGTGGGTCCGACCCCCACAAGCAGCAGCAGCAGTCGGCGGGGCCCACGCCTTTTCTTCTTGGAAAGCGGCTCCGGACTGCGGCGGCCGCGAGTGAGGAGGGGGAGAATCAGAACGGAGTCGTTGACAAAGAGGATATAGTCACCACGGCTTCCGTGGGGGGGCATACTGCTGGGTACTGGGCAATACCGGCCCGGCCCGATTTCTGGAGCTTTGCTACCCCCGAGATGGTTGTGGGCCCCAATGGTCTGGCCCCCATGGCTGGGAGGTTCTTGAGTCAGCAACCACAACAGCAGCAGCAGCAGCAGTCGGCGGCTACGACTATGGCGGCGGCTGCGGCTGAAGCCACTAGGGTTGGGAATTTCATGCCGATTGCTCAGGGACATCATCTCAATCTACTCGCCTCGCTCTCCGGAGCTCCGGCCTCCGGTGCTGGCGGAGCTTCGTTTGGACGGAGAGACGACGATCCTCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42018.p1 GENE.S_Transcript_42018~~S_Transcript_42018.p1 ORF type:complete len:293 (+),score=43.98,TCP|PF03634.9|4.2e-34,TCP|PF03634.9|2.8e+03 S_Transcript_42018:294-1172(+)
MSATDGAANGGGGGGGGAIIDPQQQQRQAAGTALGVLKKAPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTSLSSTASHHHHHQHHHHHLLHRSAASSGGSDPHKQQQQSAGPTPFLLGKRLRTAAAASEEGENQNGVVDKEDIVTTASVGGHTAGYWAIPARPDFWSFATPEMVVGPNGLAPMAGRFLSQQPQQQQQQQSAATTMAAAAAEATRVGNFMPIAQGHHLNLLASLSGAPASGAGGASFGRRDDDPR*

Click here to download the sequence:
Link to NCBI Protein BLAST