Transcript Information: S_Transcript_420185.p1


Annotated TAIR IDAT1G50270.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18622044-18623834 | Forward length=596
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32063856909856
Replicate 20.53163348331361
Replicate 31.9998147560531
Condition 2: 8 Hour
Replicate 12.5693241345943
Replicate 23.7735648307973
Replicate 32.054539528191
Condition 3: 24 Hour
Replicate 13.4214877756352
Replicate 23.5497536203918
Replicate 31.2155202122947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_420185.p1 GENE.S_Transcript_420185~~S_Transcript_420185.p1 ORF type:internal len:83 (+),score=21.16,PPR|PF01535.16|4.3,PPR|PF01535.16|5.5e-08,PPR|PF01535.16|41,PPR_2|PF13041.2|5.6,PPR_2|PF13041.2|2.5e-09,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|87 S_Transcript_420185:3-248(+)
GGTTTAGCCGATGCTCGCCAAATGTTTGATGAAATGCCTGAGAGGAATTTGAGTATTTGGACAAGTATGGTTTGTGGGTATGCTCAGAATGATTGTTTTAATGAGGCTCTGATGTTGTTTAATCAAATGGTTGCTTGTGGGGTTGAGCCAAATGGGGCGACTTTGGCGTCTGTGCTGTCGGCTTGTGCTCAGGAAGGGTGTTTAATGATAGGGGAAAGGATTGAGAAGTTCCTGAAAGAGAGAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_420185.p1 GENE.S_Transcript_420185~~S_Transcript_420185.p1 ORF type:internal len:83 (+),score=21.16,PPR|PF01535.16|4.3,PPR|PF01535.16|5.5e-08,PPR|PF01535.16|41,PPR_2|PF13041.2|5.6,PPR_2|PF13041.2|2.5e-09,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|87 S_Transcript_420185:3-248(+)
GLADARQMFDEMPERNLSIWTSMVCGYAQNDCFNEALMLFNQMVACGVEPNGATLASVLSACAQEGCLMIGERIEKFLKERG

Click here to download the sequence:
Link to NCBI Protein BLAST