Transcript Information: S_Transcript_42056.p1


Annotated TAIR IDAT5G42070.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16819118-16820119 | Reverse length=164
E-Value5.6E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1106.05080391708
Replicate 2108.54005515983
Replicate 3112.69531194803
Condition 2: 8 Hour
Replicate 177.157191097165
Replicate 277.345888764482
Replicate 374.980368459733
Condition 3: 24 Hour
Replicate 1133.48431318876
Replicate 2132.68010294696
Replicate 3129.27882056894


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42056.p1 GENE.S_Transcript_42056~~S_Transcript_42056.p1 ORF type:complete len:199 (+),score=55.32 S_Transcript_42056:152-748(+)
ATGAAGGCCCTGGTATCAGTGCCTTCATCACAATCAACCCCTTCTTTCTTATTTTCTCGCCATTGTTACAGCTACAATTCTTGCATCTTACCATGTCAAATTTCAGTATCAAGGACCACCCACCTCAAGCAGAGACTCTCCCCTTTCATTACTCTCTCTTCTTCCTCTTCTTCAATCTCCTCTGTTGTTGAACAACAAAAACAACAACAACAACAAGAAGAAGCTGAGGATTCTTCTCTTACTTCCTCCCCTCCTTCACTTGTTGAGCCTGTTGATGTCGAGGATGAAGCTGACTCCGATGCCTATGCTGCTTCTTTCAGTGGCTGCAAGGCATGTGGTAGAGAGCAGATCGAAAGAGGCTGCAATGGTGAGGGTAGGATCCAAGGTGGGATAGCTACAATCCCAGGATTTGGTTGGTGGCCAATCAAGGCTTATAGGCCTTGTCCCGGATTTGTCACATCTGGAGGTAACTACAGAAGGCGTGGACAAAGCATGGACGAGGTTGCATTCGGAGGGGGCAGAGGGGCTTCTTCATCTGACTTGGATGACGCAGAAGCAAGAAAGAAAGGAAAGGATAGAAGAAAATTCAAGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42056.p1 GENE.S_Transcript_42056~~S_Transcript_42056.p1 ORF type:complete len:199 (+),score=55.32 S_Transcript_42056:152-748(+)
MKALVSVPSSQSTPSFLFSRHCYSYNSCILPCQISVSRTTHLKQRLSPFITLSSSSSSISSVVEQQKQQQQQEEAEDSSLTSSPPSLVEPVDVEDEADSDAYAASFSGCKACGREQIERGCNGEGRIQGGIATIPGFGWWPIKAYRPCPGFVTSGGNYRRRGQSMDEVAFGGGRGASSSDLDDAEARKKGKDRRKFKS*

Click here to download the sequence:
Link to NCBI Protein BLAST