Transcript Information: S_Transcript_420912.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value1.5E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5882698294625
Replicate 21.7352755831753
Replicate 36.0094308587013
Condition 2: 8 Hour
Replicate 14.3130002888584
Replicate 24.021905373434
Replicate 36.4666054531966
Condition 3: 24 Hour
Replicate 16.136203227695
Replicate 22.2918461144621
Replicate 31.1335750294434


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_420912.p1 GENE.S_Transcript_420912~~S_Transcript_420912.p1 ORF type:internal len:89 (+),score=13.84,Sigma70_r3|PF04539.12|8.9e-13 S_Transcript_420912:1-264(+)
CCGGTTACCAGTGACTTTCCCTTGTTTCACAAGGTTGAGGCAACTTATAGAGTAAAAGAAGCAAGGAAACAACTTTATAGCGGAAATGGAAGGCAGCCTGATAATGAGGATGTTGCAGACGCAATAGGGCTCTCAATGAAGAGGCTAAACGCTGTGCTTTTGATCCCCAAGGCTCCAAGGTCGCTCGACCAGAAGGTTGGGATGAATATGAATCTTAAACCCTCGTTTTTTAGCCCTGCAATTTTGGTTTGTAAGGAAAACCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_420912.p1 GENE.S_Transcript_420912~~S_Transcript_420912.p1 ORF type:internal len:89 (+),score=13.84,Sigma70_r3|PF04539.12|8.9e-13 S_Transcript_420912:1-264(+)
PVTSDFPLFHKVEATYRVKEARKQLYSGNGRQPDNEDVADAIGLSMKRLNAVLLIPKAPRSLDQKVGMNMNLKPSFFSPAILVCKENR

Click here to download the sequence:
Link to NCBI Protein BLAST