Transcript Information: S_Transcript_421164.p1


Annotated TAIR IDAT5G16340.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5349255-5350907 | Reverse length=550
E-Value2.5E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.20309895540127
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.43169164907328
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_421164.p1 GENE.S_Transcript_421164~~S_Transcript_421164.p1 ORF type:complete len:105 (+),score=6.66,AMP-binding|PF00501.24|6.8e-06 S_Transcript_421164:69-383(+)
ATGATCAAAGAAGGCGATACAAACTTTGATTGGATCCGACCTAAGAGTGAGTGGGATCCTATTGTCATCAACTACACATCAGGCACAACATCAGCCCCAAAAGAAGTTGTTCACCGAGGGTCTTTTATTATGCCCCTTGATTCATTGATCAATTGGGCTGTCCCAAAAATCCTGTTTATCTATGGACATTACCGATGTTCCACGGTAATGGCTGGACCTTCACACGGGGGATGGCAGCAGTCGGAGGAACAAACATCTGCCTCGGTGAATACGATGGTGCCACAGTCTACGCAGCAATCCAACACCACCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_421164.p1 GENE.S_Transcript_421164~~S_Transcript_421164.p1 ORF type:complete len:105 (+),score=6.66,AMP-binding|PF00501.24|6.8e-06 S_Transcript_421164:69-383(+)
MIKEGDTNFDWIRPKSEWDPIVINYTSGTTSAPKEVVHRGSFIMPLDSLINWAVPKILFIYGHYRCSTVMAGPSHGGWQQSEEQTSASVNTMVPQSTQQSNTTV*

Click here to download the sequence:
Link to NCBI Protein BLAST