Transcript Information: S_Transcript_42133.p1


Annotated TAIR IDAT5G13720.1
Annotated Gene NameUncharacterised protein family (UPF0114)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4427960-4429029 | Forward length=262
E-Value3.7E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 166.973115691183
Replicate 281.237821152174
Replicate 384.763303589528
Condition 2: 8 Hour
Replicate 1314.79665574099
Replicate 2298.24192921702
Replicate 3297.85720825504
Condition 3: 24 Hour
Replicate 187.379533962377
Replicate 279.998752120484
Replicate 387.19143827464


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42133.p1 GENE.S_Transcript_42133~~S_Transcript_42133.p1 ORF type:3prime_partial len:151 (+),score=17.54,UPF0114|PF03350.12|1.2e-28 S_Transcript_42133:1799-2248(+)
ATGCAGGGCTGCTCTTACATTGTTGATGCATACAGAGTCCATTGGACGAGTTGTATGAAAGGAATCCACACTGGACAGATGGTCCTACGACTGGTTGAAGCCATTGATGTCTACCTTGCTGGAACAGTCATGTTGATATTTGCAATGGGATTATATGGGTTATTTATTAGTAATGTCGATCCCAATGTACATCCTAGTGTTGATCGGGCCCTAAAAGGTTCTTCCTTGTTCGGAATGTTTGCATTGAAGGAAAGGCCGAGGTGGATGAAGATAAGCTCCCTGGATGAATTGAAGACAAAGGTTGGACATGTCATTGTCATGATTCTTCTGGTAAAGATGTTTGAAAGGAGCAAGATGGTAACAATAGCAACAGGCTTGGATCTATTGAACTATTCTATCTGTATTTTCCTGTCATCGGCGTCCTTGTATATCCTTCATAATCTGCATAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42133.p1 GENE.S_Transcript_42133~~S_Transcript_42133.p1 ORF type:3prime_partial len:151 (+),score=17.54,UPF0114|PF03350.12|1.2e-28 S_Transcript_42133:1799-2248(+)
MQGCSYIVDAYRVHWTSCMKGIHTGQMVLRLVEAIDVYLAGTVMLIFAMGLYGLFISNVDPNVHPSVDRALKGSSLFGMFALKERPRWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLNYSICIFLSSASLYILHNLHK

Click here to download the sequence:
Link to NCBI Protein BLAST