Transcript Information: S_Transcript_42136.p1


Annotated TAIR IDAT5G13720.1
Annotated Gene NameUncharacterised protein family (UPF0114)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4427960-4429029 | Forward length=262
E-Value6E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.268197801251
Replicate 234.842328864053
Replicate 335.373772488217
Condition 2: 8 Hour
Replicate 1157.31845315918
Replicate 2157.09194263415
Replicate 3147.34725256995
Condition 3: 24 Hour
Replicate 130.439591749189
Replicate 233.066872627786
Replicate 332.664614885314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42136.p1 GENE.S_Transcript_42136~~S_Transcript_42136.p1 ORF type:3prime_partial len:183 (+),score=24.18,UPF0114|PF03350.12|1.5e-06 S_Transcript_42136:236-781(+)
ATGAAGTTCATAACCTCGTCCCCATGTTCATCATCCTCCCTTTCCTTTCTTCCACTCATACATCAATACCATAACTCATCACCCAAGAATAAAATCCCACCAAAAATTACAAGAAAAGTGAATAAACTGTTGGGCTTCTGGAATTCATCTAGAATTGTTTGTCTTAGTTCACCAGCCCCTGAATCAGTCCCTTCTTCTAGTGACATCCTTTCTCCACCTAACTCTGTTTCTGCTGCTAGTACTACTCATACTATCAATAATAATAATAATAATCAGCCTGATCCTAAATTCAGTAATCATGCACTTGCAAGCTCTAATGGTAGCCCTTTTGCTAGAATTATCCAAACTGCTGAGTCTTCCATTGAACGGTTTATATTTGATTTTCGATTCCTGGCACTTCTTGCGATTGGAGGATCACTGGCTGGTTCAGTCCTATGTTTCTTGAATGGCTGCTCTTACATTGTTGATGCATACAGAGTCCATTGGACGAGTTGTATGAAAGGAATCCACACTGGACAGATGGTCCTACGACTGGTTGAAGCCATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42136.p1 GENE.S_Transcript_42136~~S_Transcript_42136.p1 ORF type:3prime_partial len:183 (+),score=24.18,UPF0114|PF03350.12|1.5e-06 S_Transcript_42136:236-781(+)
MKFITSSPCSSSSLSFLPLIHQYHNSSPKNKIPPKITRKVNKLLGFWNSSRIVCLSSPAPESVPSSSDILSPPNSVSAASTTHTINNNNNNQPDPKFSNHALASSNGSPFARIIQTAESSIERFIFDFRFLALLAIGGSLAGSVLCFLNGCSYIVDAYRVHWTSCMKGIHTGQMVLRLVEAI

Click here to download the sequence:
Link to NCBI Protein BLAST