Transcript Information: S_Transcript_42210.p1


Annotated TAIR IDAT4G37790.1
Annotated Gene NameHomeobox-leucine zipper protein family
Annotated Gene Symbol(s)HAT22
Annotation TypeOrtholog
Chromosome Positionchr4:17768241-17769272 | Forward length=278
E-Value4.6E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.113907217777
Replicate 245.364191862118
Replicate 347.951113817362
Condition 2: 8 Hour
Replicate 168.615378669512
Replicate 262.641176191234
Replicate 365.518184217416
Condition 3: 24 Hour
Replicate 134.875164870949
Replicate 234.989744188045
Replicate 331.062938898933


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42210.p1 GENE.S_Transcript_42210~~S_Transcript_42210.p1 ORF type:complete len:285 (+),score=45.24,Homeobox|PF00046.25|4.5e-16,HALZ|PF02183.14|1.6e+04,HALZ|PF02183.14|6e-10 S_Transcript_42210:158-1012(+)
ATGGGCTCCTCTGGAGATGATCAAGCAGCCTCTCTAACCCTTGGTTTAGGCTTCCCATCTTCAACAAAATCCACCCACCAAAGCAGCTTGAATTTGAATTCGATCACCAGCGTCGTCAAACAGCAACCTCCTGCTGTTTTTGGCTACGTCCATGAACCATCCTTGACACTTAGCCTTTCGGGAGAAACCTATCAACGGGTTTCTCCCGAGATCAGGAAGATCGAAGACCAGCCTTGTAGCGTCTCCGCTGCTTCTTCTCTCTCTAACACGGTTACCACCGCCGTTGTTGTTTCCGTCAAGAGAGAGAGGGAAACCGCTAGCTCTGACGATCTCGACACCGACCGCGGTTGTTCCAGGGCTAGTGATGAAGAAGAGGATGGTAGTGGTCCTAATACCACTACTCGCAAGAAGCTCCGTCTCACCAAAGAGCAGTCCGCTCTTCTTGAGGAGAGCTTCAAGCAACATAGCACCCTCAACCCTAAACAAAAACAAGCCCTCGCTGATCGGTTGAATCTCCGGCCTCGTCAGGTCGAGGTCTGGTTCCAGAACCGCAGGGCAAGGACAAAGCTGAAGCAGACGGAAGTGGACTGCGAGTATCTGAAAAAGTGCTGCGAGACGCTAACGGATGAGAACAGGAGGCTACAGAAGGAGCTGCAGGAATTGAAGGCGTTGAAATTGGCGCAGCCCTTGTACATGCACTTGCCCGCAGCAACTCTGACCATGTGCCCTTCATGTGAGAGGATCGGGGCCGGCGTTCCCATCGCTGCCGGAACTCCTACTTCCAAGAACCCCTTCTCCATGGGTTCCAAGCCTCTTTTCTACAGTTCTTTCCCTAATCCTTCCGCTGCTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42210.p1 GENE.S_Transcript_42210~~S_Transcript_42210.p1 ORF type:complete len:285 (+),score=45.24,Homeobox|PF00046.25|4.5e-16,HALZ|PF02183.14|1.6e+04,HALZ|PF02183.14|6e-10 S_Transcript_42210:158-1012(+)
MGSSGDDQAASLTLGLGFPSSTKSTHQSSLNLNSITSVVKQQPPAVFGYVHEPSLTLSLSGETYQRVSPEIRKIEDQPCSVSAASSLSNTVTTAVVVSVKRERETASSDDLDTDRGCSRASDEEEDGSGPNTTTRKKLRLTKEQSALLEESFKQHSTLNPKQKQALADRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKKCCETLTDENRRLQKELQELKALKLAQPLYMHLPAATLTMCPSCERIGAGVPIAAGTPTSKNPFSMGSKPLFYSSFPNPSAAC*

Click here to download the sequence:
Link to NCBI Protein BLAST