Transcript Information: S_Transcript_42217.p1


Annotated TAIR IDAT1G44770.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16907834-16909409 | Reverse length=271
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.925637345954
Replicate 218.628487409411
Replicate 317.311813587908
Condition 2: 8 Hour
Replicate 128.769158635378
Replicate 226.276369392886
Replicate 323.930055330121
Condition 3: 24 Hour
Replicate 116.280620714688
Replicate 216.142620509568
Replicate 316.775038967554


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42217.p1 GENE.S_Transcript_42217~~S_Transcript_42217.p1 ORF type:complete len:212 (+),score=44.54 S_Transcript_42217:457-1092(+)
ATGGGCCATGGCCGTGAGGCAGAGCTTGCTTGGTCTTCCGTCGAACTCGTTCACCTCCATAAACACCAACATTATGATGATCAAAACCCTAATCACGAAAACCCTAATGAAGCCAATTCCAGTCTTTCTCCTCAAGACCTCGAGGATCTTCGGAAAGAGAATAAGCGGTTGAGAGAATTGCTGGAGCAGAATTTGAAGCTTCTGCAAAATCTTTCAATTTCTCCTTGCTTAAACGATTGCCCTCCTGATCTACACGAACGTCTTGTTGCGGCTGTAGATTCTAAAAGTTTCTTGACTCATCTTGAGCCCTTGCATAATGGATCAGTTAATGGAGCCAGAAATGAGTTCCCTTTCAAGGAGCCTACAGGAGCAGACTTGGAGTCTGCTGAAATTATGATCAATGTTGACCAAGAAGAGCCGAGTTGGTGGGTGTGGGTGACTGATGAAATGGTTCCGGGTACTGTTGAGGAACGCAGTGGAATAGATGATGAGAATTATGTCATAGTTTGTGAGGAACATGTGGTGGATGGGGTTGCTAACTTCATTGCCAGATGTATTGTGTCGAATCCGAAAGTAAAGAAAATGACTCCGGAGCAGCTGCAAAGTAGTAAGTTTATGACATTATGTTGCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42217.p1 GENE.S_Transcript_42217~~S_Transcript_42217.p1 ORF type:complete len:212 (+),score=44.54 S_Transcript_42217:457-1092(+)
MGHGREAELAWSSVELVHLHKHQHYDDQNPNHENPNEANSSLSPQDLEDLRKENKRLRELLEQNLKLLQNLSISPCLNDCPPDLHERLVAAVDSKSFLTHLEPLHNGSVNGARNEFPFKEPTGADLESAEIMINVDQEEPSWWVWVTDEMVPGTVEERSGIDDENYVIVCEEHVVDGVANFIARCIVSNPKVKKMTPEQLQSSKFMTLCCF*

Click here to download the sequence:
Link to NCBI Protein BLAST