Transcript Information: S_Transcript_42221.p1


Annotated TAIR IDAT1G44770.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16907834-16909409 | Reverse length=271
E-Value2.1E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.464148964236
Replicate 219.27507246541
Replicate 320.440144323702
Condition 2: 8 Hour
Replicate 122.634168784249
Replicate 221.24114148826
Replicate 321.161942568122
Condition 3: 24 Hour
Replicate 122.318057862232
Replicate 218.00013915811
Replicate 315.570287340342


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42221.p1 GENE.S_Transcript_42221~~S_Transcript_42221.p1 ORF type:complete len:277 (+),score=65.51 S_Transcript_42221:456-1286(+)
ATGGGCCATGCCCGTGAGGCAGTGGAGGTGGCGAAAACGGTGTTAGAGGTGGCAGAGCTTGCTTGGTCTGCCGTCGAACACGTTCACCACCATAAACACCAACATTATGATGATCAAAACCCTAATCACGAAAACCCTAATGAAGCCAATTCCAGTCTTTCTCCTCAAGACCTCGAGGATCTTCGGAAAGAGAATAAGCGGTTGAGAGAATTGCTGGAGCAGAATTTGAAGCTTCTGCAAAATCTTTCAATTTCTCCTTGCTTAAACGATTGCCCTCCTGATCTACACGAACGTCTTGTTGCGGCTGTAGATTCTAAAAGTTTCTTGACTCATCTTGAGCCCTTGCATAATGGATCAGTTAATGGAGCCAGAAATGAGTTCCCTTTCAAGGAGCCTACAGGAGCAGACTTGGAGTCTGCTGAAATTATGATCAATGTTGACCAAGAAGAGCCGAGCTGGTGGGTGTGGTTGACTGATGAAATGGTTCCAGGTACTGTTGAGGAACGCAGTGGAATAGATGATGAGAATTATGTCATAGTTTGTGAGGAACATGTGGTGGATGGGGTTGCTAACTTCATTGCTAGATGTATCATGTCGAATCCAAAAGTAAAGAAAATGACTCCGGAGCAGCTGCAAAGTACTGTCACAAGCTCATTGGGTGGAATGAACAAGTTTGAGAAGATGCTGAATATATGGCATGCTGGAAACATATTTTATGCCCTTTCTACCTGGGGACTTGCTCTGGCAGGGTTGTACCAGAGCCGTGCAGCTCTGAAGCTTGCTGCTCGAGGTGTACACTCAACCACTAAACTTGTCTTAAAGGCTATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42221.p1 GENE.S_Transcript_42221~~S_Transcript_42221.p1 ORF type:complete len:277 (+),score=65.51 S_Transcript_42221:456-1286(+)
MGHAREAVEVAKTVLEVAELAWSAVEHVHHHKHQHYDDQNPNHENPNEANSSLSPQDLEDLRKENKRLRELLEQNLKLLQNLSISPCLNDCPPDLHERLVAAVDSKSFLTHLEPLHNGSVNGARNEFPFKEPTGADLESAEIMINVDQEEPSWWVWLTDEMVPGTVEERSGIDDENYVIVCEEHVVDGVANFIARCIMSNPKVKKMTPEQLQSTVTSSLGGMNKFEKMLNIWHAGNIFYALSTWGLALAGLYQSRAALKLAARGVHSTTKLVLKAI*

Click here to download the sequence:
Link to NCBI Protein BLAST