Transcript Information: S_Transcript_42224.p1


Annotated TAIR IDAT5G13950.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4496196-4500206 | Reverse length=954
E-Value6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.496565743476
Replicate 221.253640796237
Replicate 319.389673633125
Condition 2: 8 Hour
Replicate 118.4055324742
Replicate 217.667743546777
Replicate 318.65788127771
Condition 3: 24 Hour
Replicate 124.622228090865
Replicate 222.663811576347
Replicate 323.002011156744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42224.p1 GENE.S_Transcript_42224~~S_Transcript_42224.p1 ORF type:5prime_partial len:409 (+),score=74.80 S_Transcript_42224:2-1228(+)
ACCCCAACTACTCAGTATGCATCTTCTAGTGTGCCATGTCTCAGGCATCCACAAGCCATCCCAGATCGCCATACCCCAACTACTCAGTATGCATCTTCTAGTGTGCCATGTCTCAGGCATCCACAAGCCATCCCAGATCGCCATACCCCAACTACTCAGTATGCATCTTCTAGTGAGCTATCTCTCAGGGATCCACAAGCCATCTCAGATTGCCTTACCCCAACTACTCAGTATGCATCTTCTAGTGAGCCATCTCTCAGGCATCCACAAGCTGTCCCAGATCGCCATAACCCAACTGCTCAGTATGCATCTGCTGGTGAGCCATCTCTCAGGCATCCACAAGCTGTCCCAGACCAGCCAGCTCGCTTGATTGACCTTGAGTCTGACATGACTGCTGAAGATGCCACCAAAGATCTGTTGAACCGGCATACAAATCATCTACCGTTTTTCAATCCTTATCCTAATAGAGACAGAAGTGAGCTGCTCCATTCTCTTATCAAGCGTGACAATTATTATCAGGAGCAGAAGAAGACGGGATTGGAGTTCCATCCAACAACTAATGTTTTGTTGGAGTCTAGCCAGTATCCTAGTCATTTGCAGGAACAGTTGCAGCCATCATTTGCATTGGATAATAGGCACAAATCGCAGAGTGAACTATTCATGAATACGACCATCCCAGACAACATTTATCCCGACAGCAGCAGGTACCCCGTCCAGGGACAAGGACATTTCTCAACCGTGAATGTGAGAGACTGGAGTAATGCCCGTATCTCACCTCCTATCCAGCCGCCATCCCAATTGAGCTCTGGAGAGCTGTTGAACCACAATTGGTTTGCTAGTGAAAGCAGAGCTCATGTTGGCTTATCAGGCTCAGACCGTGCGGTTTTCTCAAGCCCAAATATTGCAAGTGGGAGCAGTAGTGGGGATCAGAGCCTTTACAGTGTCCTCTCGCAATGCAATACTCTGCGTGCTCAAGCTCCATATAATCCCGTTGGCTCAACCGAGCAGATTATCCCCCCAACAAACTACGGCCAAGACATGGGTGGCAGTATTCCTGTGACGAGCACTACTTTACCACAGCCAGTTTCTCCGTTTGACTATTTGAGTGGGAGCGAGGCTGCTTCTACCTTGAAGAACACCAACATGGGGTGGATGAGCTTGGGGCACCAAGCTTCAGGTTTGCATGATCCATCTGGAAAACCTTTCTTAAAGTCTTGGAACCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42224.p1 GENE.S_Transcript_42224~~S_Transcript_42224.p1 ORF type:5prime_partial len:409 (+),score=74.80 S_Transcript_42224:2-1228(+)
TPTTQYASSSVPCLRHPQAIPDRHTPTTQYASSSVPCLRHPQAIPDRHTPTTQYASSSELSLRDPQAISDCLTPTTQYASSSEPSLRHPQAVPDRHNPTAQYASAGEPSLRHPQAVPDQPARLIDLESDMTAEDATKDLLNRHTNHLPFFNPYPNRDRSELLHSLIKRDNYYQEQKKTGLEFHPTTNVLLESSQYPSHLQEQLQPSFALDNRHKSQSELFMNTTIPDNIYPDSSRYPVQGQGHFSTVNVRDWSNARISPPIQPPSQLSSGELLNHNWFASESRAHVGLSGSDRAVFSSPNIASGSSSGDQSLYSVLSQCNTLRAQAPYNPVGSTEQIIPPTNYGQDMGGSIPVTSTTLPQPVSPFDYLSGSEAASTLKNTNMGWMSLGHQASGLHDPSGKPFLKSWNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST