Transcript Information: S_Transcript_42243.p1


Annotated TAIR IDAT1G08820.1
Annotated Gene Namevamp/synaptobrevin-associated protein 27-2
Annotated Gene Symbol(s)VAP27-2
Annotation TypeHomolog
Chromosome Positionchr1:2821810-2824412 | Reverse length=386
E-Value2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.871324033979
Replicate 211.463998495571
Replicate 37.352986281697
Condition 2: 8 Hour
Replicate 112.614038063402
Replicate 210.454818155166
Replicate 313.792607273811
Condition 3: 24 Hour
Replicate 110.208556663905
Replicate 28.4433807833451
Replicate 38.3249231533226


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42243.p1 GENE.S_Transcript_42243~~S_Transcript_42243.p1 ORF type:complete len:306 (+),score=61.09,Motile_Sperm|PF00635.22|4.5e-26,Motile_Sperm|PF00635.22|1.5e+03 S_Transcript_42243:880-1797(+)
ATGGGTACAGAATTAGTGGAGGTTCAACCTCTTGAGCTTCGTTTTATTGTTGAGGCAAACAAGCAAAGTTCATGTTCGATTCAACTTGGCAATAAATCTGATCAGTATGTTGCTTTCAAGGTGAAAACCACATCCCCCAAGAAGTATTGCGTGCGCCCTAATGTAGGTATCATAAAGCCAAACGGGACACATGGCTTCACAGTTACTATGCAAGTGCAGCGAGCTGCTCCGCTTGACTTACAGTGCAAAAACAAGTTTTTAATTCAATGTACTGTTGTTACCAGTGGAACAATGGAAGAAGACATTACATCTGACATGTTTGTTAAAGACACTGGCCGACAAATCGAAGAGAAAAAGATGAGAGTGATCCTTGTATGTGCACCTCAATCCACTGTTCTAGTACCTGTCAATGGAGTCCCAAATCAAGATCCACCAAATGACACTGGAGTAAAAGATAGGATGCCAGTTGGAGTTGAAAATCTTCCACCATCTCATAAGGAATCAGTAGGGCTGAAAATTGCAAAGCCTATTGAAGGCTTAAGATTCACCAGTGAAGCAGAGTCAGCATTGGAGTGCACGCCTGACCTGGCAACGACAAAATGTGCAGATACGAGAGAAGTAAAAAATGTGGAGGAGATACAGTCCTTGAATCCTGTGATGGAAGAATGTAAGAAACAGTATGAGGATCTAAATTCAAAAGTAGATATGTTGACATCAAAAGTAGCTGAGGCTGAACAAACTGTTGCCAAGCTAACAGAAGAAAGAAACAATGCTGTGCAAGATAAGGAAATGGTCAAGCGAGAACTAACATTTTTGAAGTGGAGACTTCGTGGGAAGACAGTTCATATTGGTTTTCCTCTGCTATATGTTTGTATGGTTGCACTGATCTCTCTTACACTAGGATATCTAATGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42243.p1 GENE.S_Transcript_42243~~S_Transcript_42243.p1 ORF type:complete len:306 (+),score=61.09,Motile_Sperm|PF00635.22|4.5e-26,Motile_Sperm|PF00635.22|1.5e+03 S_Transcript_42243:880-1797(+)
MGTELVEVQPLELRFIVEANKQSSCSIQLGNKSDQYVAFKVKTTSPKKYCVRPNVGIIKPNGTHGFTVTMQVQRAAPLDLQCKNKFLIQCTVVTSGTMEEDITSDMFVKDTGRQIEEKKMRVILVCAPQSTVLVPVNGVPNQDPPNDTGVKDRMPVGVENLPPSHKESVGLKIAKPIEGLRFTSEAESALECTPDLATTKCADTREVKNVEEIQSLNPVMEECKKQYEDLNSKVDMLTSKVAEAEQTVAKLTEERNNAVQDKEMVKRELTFLKWRLRGKTVHIGFPLLYVCMVALISLTLGYLMQ*

Click here to download the sequence:
Link to NCBI Protein BLAST