Transcript Information: S_Transcript_42250.p1


Annotated TAIR IDAT1G08820.1
Annotated Gene Namevamp/synaptobrevin-associated protein 27-2
Annotated Gene Symbol(s)VAP27-2
Annotation TypeHomolog
Chromosome Positionchr1:2821810-2824412 | Reverse length=386
E-Value2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1727763256181
Replicate 21.4209932257382
Replicate 35.0639377043107
Condition 2: 8 Hour
Replicate 12.0963943023622
Replicate 26.8253097544929
Replicate 32.0954562052354
Condition 3: 24 Hour
Replicate 10.74050452510489
Replicate 22.9194062369532
Replicate 33.7619320468648


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42250.p1 GENE.S_Transcript_42250~~S_Transcript_42250.p1 ORF type:complete len:295 (+),score=55.76,Motile_Sperm|PF00635.22|4.1e-26,Motile_Sperm|PF00635.22|1.5e+03 S_Transcript_42250:880-1764(+)
ATGGGTACAGAATTAGTGGAGGTTCAACCTCTTGAGCTTCGTTTTATTGTTGAGGCAAACAAGCAAAGTTCATGTTCGATTCAACTTGGCAATAAATCTGATCAGTATGTTGCTTTCAAGGTGAAAACCACATCCCCCAAGAAGTATTGCGTGCGCCCTAATGTAGGTATCATAAAGCCAAACGGGACACATGGCTTCACAGTTACTATGCAAGTGCAGCGAGCTGCTCCGCTTGACTTACAGTGCAAAAACAAGTTTTTAATTCAATGTACTGTTGTTACCAGTGGAACAATGGAAGAAGACATTACATCTGACATGTTTGTTAAAGACACTGGCCGACAAATCGAAGAGAAAAAGATGAGAGTGATCCTTGTATGTGCACCTCAATCCACTGTTCTAGTACCTGTCAATGGAGTCCCAAATCAAGATCCACCAAATGACACTGGAGTAAAAGATAGGATGCCAGTTGGAGTTGAAAATCTTCCACCATCTCATAAGGAATCAGTAGGGCTGAAAATTGCAAAGCCTATTGAAGGCTTAAGATTCACCAGTGAAGCAGAGTCAGCATTGGAGTGCACGCCTGACCTGGCAACGACAAAATGTGCAGATACGAGAGAAGTAAAAAATGTGGAGGAGATACAGTCCTTGAATCCTGTGATGGAAGAATGTAAGAAACAGTATGAGGATCTAAATTCAAAAGTAGATATGTTGACATCAAAAGTAGCTGAGGCTGAACAAACTGTTGCCAAGCTAACAGAAGAAAGAAACAATGCTGTGCAAGATAAGGAAATGGTCAAGCGAGAACTAGTGAGTGTTCTTTTTCTTAGGCTCTATTTATTTCTTTTTTTGGAAATTCTTTTAGTATATTCCATTGGTTTCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42250.p1 GENE.S_Transcript_42250~~S_Transcript_42250.p1 ORF type:complete len:295 (+),score=55.76,Motile_Sperm|PF00635.22|4.1e-26,Motile_Sperm|PF00635.22|1.5e+03 S_Transcript_42250:880-1764(+)
MGTELVEVQPLELRFIVEANKQSSCSIQLGNKSDQYVAFKVKTTSPKKYCVRPNVGIIKPNGTHGFTVTMQVQRAAPLDLQCKNKFLIQCTVVTSGTMEEDITSDMFVKDTGRQIEEKKMRVILVCAPQSTVLVPVNGVPNQDPPNDTGVKDRMPVGVENLPPSHKESVGLKIAKPIEGLRFTSEAESALECTPDLATTKCADTREVKNVEEIQSLNPVMEECKKQYEDLNSKVDMLTSKVAEAEQTVAKLTEERNNAVQDKEMVKRELVSVLFLRLYLFLFLEILLVYSIGFW*

Click here to download the sequence:
Link to NCBI Protein BLAST