Transcript Information: S_Transcript_422540.p1


Annotated TAIR IDAT4G05040.1
Annotated Gene Nameankyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2579888-2581774 | Forward length=572
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11181933292093
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_422540.p1 GENE.S_Transcript_422540~~S_Transcript_422540.p1 ORF type:complete len:238 (-),score=39.01,Ank_3|PF13606.2|2.3e+02,Ank_3|PF13606.2|3.5,Ank_3|PF13606.2|0.0036,Ank_3|PF13606.2|0.0071,Ank_3|PF13606.2|2.2,Ank_3|PF13606.2|3.8e+03,Ank_2|PF12796.3|5.4e-08,Ank_2|PF12796.3|8.2e-06,Ank_2|PF12796.3|1.9,Ank_4|PF13637.2|1.3e+03,Ank_4|PF13637.2|1.2e+02,Ank_4|PF13637.2|0.00029,Ank_4|PF13637.2|0.0034,Ank_4|PF13637.2|2.9,Ank_5|PF13857.2|10,Ank_5|PF13857.2|7.5e-05,Ank_5|PF13857.2|3.1,Ank_5|PF13857.2|6,Ank|PF00023.26|1.5,Ank|PF00023.26|0.083,Ank|PF00023.26|0.46,Ank|PF00023.26|3.5e+02,Ank|PF00023.26|5.2e+02 S_Transcript_422540:175-888(-)
ATGGAGACTGGAGAAGCTGAGGTGAAAGGATACATGGATGGGAAGCTGTACATAGCAGCAAGAGATGGGAATGAAGATTACCTCAATGAAGTTGGGATACAAAGCACAGAAGCCGAAAATGGCCAGGGAACTCGAGACGAGCACTACTTTCTGGCGAAGACACCAGACGGGGACAACCTTCTTCACTTGGCAGCAAGCCGAGACCGGCTTGGCTTCATTGTCAAGGCCCTCGACAAAATTCCGGCATTGGTGTTACTCATCTGCTGGAGCAACTCCAAAGGGGAAAACCCCCTCCACCTTGCAGCCCGGTTAGGACACCTAGAGATAGTAGAAGTCCTAGTGACCTCTTACAAATCTCACTTGCAGGATGTGAAAGAAGGTAAAGTGCGGTCCTCCTTGTTATCCCTCATGGTGGCTGAAGAAGGCTTGGCCAGTCCAGAACCATGGATGGCTCAAGACTCCAGAGGGAACACGCCTCTACACGAGGCCCTTAAGAATGGATACGAGGAGGTAGCTACGTGCCTACTCAAGGTGGAACCGAAGTTGGCTGGTTATGATAACAATGCCGATGAGAGCATCCTCTTCCTCGCAGCAACTTATGGTCATGAGAGTGTGCTAGAGATGATCCTGACTTCAGATATCTCATACAGCTTAAGTGCACCAGTTGGATTGACTCCACTACATGGAGTAATACATAGTTGTACAGGTACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_422540.p1 GENE.S_Transcript_422540~~S_Transcript_422540.p1 ORF type:complete len:238 (-),score=39.01,Ank_3|PF13606.2|2.3e+02,Ank_3|PF13606.2|3.5,Ank_3|PF13606.2|0.0036,Ank_3|PF13606.2|0.0071,Ank_3|PF13606.2|2.2,Ank_3|PF13606.2|3.8e+03,Ank_2|PF12796.3|5.4e-08,Ank_2|PF12796.3|8.2e-06,Ank_2|PF12796.3|1.9,Ank_4|PF13637.2|1.3e+03,Ank_4|PF13637.2|1.2e+02,Ank_4|PF13637.2|0.00029,Ank_4|PF13637.2|0.0034,Ank_4|PF13637.2|2.9,Ank_5|PF13857.2|10,Ank_5|PF13857.2|7.5e-05,Ank_5|PF13857.2|3.1,Ank_5|PF13857.2|6,Ank|PF00023.26|1.5,Ank|PF00023.26|0.083,Ank|PF00023.26|0.46,Ank|PF00023.26|3.5e+02,Ank|PF00023.26|5.2e+02 S_Transcript_422540:175-888(-)
METGEAEVKGYMDGKLYIAARDGNEDYLNEVGIQSTEAENGQGTRDEHYFLAKTPDGDNLLHLAASRDRLGFIVKALDKIPALVLLICWSNSKGENPLHLAARLGHLEIVEVLVTSYKSHLQDVKEGKVRSSLLSLMVAEEGLASPEPWMAQDSRGNTPLHEALKNGYEEVATCLLKVEPKLAGYDNNADESILFLAATYGHESVLEMILTSDISYSLSAPVGLTPLHGVIHSCTGT*

Click here to download the sequence:
Link to NCBI Protein BLAST