Transcript Information: S_Transcript_422658.p1


Annotated TAIR IDAT5G56310.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22802322-22803914 | Forward length=530
E-Value1.6E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2948809001128
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.5907310337156
Replicate 20.43380315921908
Replicate 30.64951336192464
Condition 3: 24 Hour
Replicate 10.12102428526645
Replicate 20
Replicate 30.069867159016942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_422658.p1 GENE.S_Transcript_422658~~S_Transcript_422658.p1 ORF type:internal len:361 (+),score=73.95,PPR|PF01535.16|0.24,PPR|PF01535.16|0.001,PPR|PF01535.16|6.5e-06,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|1.8,PPR|PF01535.16|0.23,PPR|PF01535.16|6.8,PPR_2|PF13041.2|0.69,PPR_2|PF13041.2|0.00039,PPR_2|PF13041.2|4.2e-09,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|7.2e-11,PPR_2|PF13041.2|11,PPR_2|PF13041.2|31,PPR_2|PF13041.2|3.3e+02,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|81,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|2.3,PPR_1|PF12854.3|0.077,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|0.34,TPR_19|PF14559.2|7.8,TPR_19|PF14559.2|4.7e+02,TPR_19|PF14559.2|72,TPR_19|PF14559.2|0.082 S_Transcript_422658:3-1082(+)
GTAGTGATTGCTCTTGTGCGAATGTACTCAGCAGGTCACCGGGTTGATGATGCACGTAAGGTGTTCGATGAAATGTCTAGTTCAAATGATGATGTCGCGTTGTGGAATGCAATGGTTGCTGGGTATGCTGGTGTAGGTGACATGAGTAATGCGAGGGCTTTGTTTGAGGTTATGTCTGAGAGAGATGTGATCTCTTGGACTACGATTGTTGCTGGTTATGTTCATGTGAATCGACCAAGTGAAGCAATTGAGATCTTTCGGAGAATGCAGGGTGATGGTGTGAAGCCTGACGAAGTTGCTTTGCTGTCTGCTCTTTCAGCTTGTGCTGATTTAGGTGCACTTGAGTTGGGGGAGTGGATACATGACTTCATTCATAAGCATGGCTTGCGTAAAACTCTCCCTTTATGCAATGCTCTTGTTGACATGTATGTAAAATCAGGGAGTATAGAAAAGGCCTTAGAGATATTCGAGAGTATGAAGCACAAGAATGTCGTATCTTGGACAACCATGATTGCAGGAATGGCCTTTCATGGGCTCGGAAAGGAAGCATTGGAGATGTTTTCTCATATGGAAAGAGCAGGAGCCAAGCCGAATGAGATCACCTTCATTGGTATCCTTTCTGCTTGTAGCCATGTTGGGTTAGTCGAATTAGGCTTGTCATATTTCGACTCTATGTACTCAGAATATGGCATCACACCAAAGATTCAGCACTATGGTTGTATAATCGATTTGCTTGGCCGCGCTGGTTGTCTAAAAGAAGCTGAAGATCTAGTAGCAAGGAAGCTTTTTAATGGTAATGCAGCTATATGGGGGTCCTTACTTGCGGCTTCTAGAGTACATGGCAATTCCACACTTGCTACAAAAGCATTGAAGCATTTGTCAATTTTGGAGCCTAATAATAGTGGGAACTATGCTCTTCTTTCGAATACATATGCTGCTCTTGGACAATGGAATGAAGCTAGATTGGTAAGGAAAACAATGAGAAGCTCAGGTGTGAGTAAATTGCCAGGTCAAAGTAGTATTGAAGTAGACAATTGTATTCACAGTTTCATTACTGGCAGTGTCTCTTGTCCCAAGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_422658.p1 GENE.S_Transcript_422658~~S_Transcript_422658.p1 ORF type:internal len:361 (+),score=73.95,PPR|PF01535.16|0.24,PPR|PF01535.16|0.001,PPR|PF01535.16|6.5e-06,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|1.8,PPR|PF01535.16|0.23,PPR|PF01535.16|6.8,PPR_2|PF13041.2|0.69,PPR_2|PF13041.2|0.00039,PPR_2|PF13041.2|4.2e-09,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|7.2e-11,PPR_2|PF13041.2|11,PPR_2|PF13041.2|31,PPR_2|PF13041.2|3.3e+02,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|81,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|2.3,PPR_1|PF12854.3|0.077,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|0.34,TPR_19|PF14559.2|7.8,TPR_19|PF14559.2|4.7e+02,TPR_19|PF14559.2|72,TPR_19|PF14559.2|0.082 S_Transcript_422658:3-1082(+)
VVIALVRMYSAGHRVDDARKVFDEMSSSNDDVALWNAMVAGYAGVGDMSNARALFEVMSERDVISWTTIVAGYVHVNRPSEAIEIFRRMQGDGVKPDEVALLSALSACADLGALELGEWIHDFIHKHGLRKTLPLCNALVDMYVKSGSIEKALEIFESMKHKNVVSWTTMIAGMAFHGLGKEALEMFSHMERAGAKPNEITFIGILSACSHVGLVELGLSYFDSMYSEYGITPKIQHYGCIIDLLGRAGCLKEAEDLVARKLFNGNAAIWGSLLAASRVHGNSTLATKALKHLSILEPNNSGNYALLSNTYAALGQWNEARLVRKTMRSSGVSKLPGQSSIEVDNCIHSFITGSVSCPKA

Click here to download the sequence:
Link to NCBI Protein BLAST