Transcript Information: S_Transcript_42273.p1


Annotated TAIR IDAT3G18930.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6524110-6525345 | Reverse length=411
E-Value2.3E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.054068984229
Replicate 23.7403746424288
Replicate 33.7157355254429
Condition 2: 8 Hour
Replicate 13.2485852571554
Replicate 22.5285136054728
Replicate 33.5089970258814
Condition 3: 24 Hour
Replicate 13.0593571473314
Replicate 23.6195276473282
Replicate 32.4168543778858


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42273.p1 GENE.S_Transcript_42273~~S_Transcript_42273.p1 ORF type:complete len:407 (+),score=-25.88,zf-RING_2|PF13639.2|8.8e-15,zf-RING_11|PF17123.1|3.4e-11,zf-rbx1|PF12678.3|4.5e-08,zf-C3HC4|PF00097.21|5.3e-06,zf-C3HC4_2|PF13923.2|5.8e-06 S_Transcript_42273:542-1762(+)
ATGGCGGCCAAACCACCAGACCACCACCACAACAACCACCCCGCCGCAGCTCCAACCACGCCATCAACCTCTCTCCTGATCAACCAATCTCCACCGTCGAAACTACCGATCGACTTCAGTCCACCGTTGATCGCGATGGTAGTAGTAGCAGCAGCAGCTTTCTTACTCGTAACCTACTCTCGACTAATCTCTCGCCACCTCTTCCCTCCCTTTCTCCGCCTCCTCCGACGCTACAGACGGTGGCGCCGACTACGACGCCTCCGCCGCGCTCACTTCCCGCCATCTGACCTCGGGTCTCCTCCTCCACCTTACGAATCGTCCGACGGTTTCTACTTCTACTCCCCGTACGGCCTCGACGAATCCGTGATCAAGACCATCCCTCTCACCATATTCGAACTCCCTAAGAGTAACAACAAATTAACCTCCAAATTAGGGTTAAAAATCGAAGAGGAATTCAACGACTGTGCAGTATGTTTGTTAGAATTCGAAGACGGTGATTACATCCGTACGTTACCTCTCTGTTCACACTCATTCCACGTGGACTGTATCGACATGTGGCTTCAATCACACGCCACGTGTCCCCTCTGCCGGTCCGGAGTCTTCCTACCACCGCCGATAGTCGACTCGCCGTTAACTCCGTTAATGGCGTCGAGAATCCGGCCAAGCCTCGACGAAGGCTTCCTCCTTGAGAGCATCTTTCTGGAGCCATTACCGGAAGGACCTGAACAAAATTCCGGCGAAATTCAGCCGGTAATAAGATCAGATGATTTCTTCAGCACTCAATCTGAAGATCAGCGTCCACGAGAACACGATTTCCTGCTAAAAAGATCGTACTCGTTCGGTTTCGAAAGGAGCTTCCCTTCGGAAAGGATAGTTCTAGAGGCAGCGACGACGCCGTATCATCAGAACAGGAGACGGAGCTTCTTCTGGACAAAACGACCTTCATCGTCAACGCCGTTCAGCTCGATCGCGAAATCGAGAGTGTTCTCATTCAGGTTAAAGTCGCCAGGAGGATTCTTCCGGCGGAAAACATTCTTTCCGTTCTCGGAATCGTCAGCGAGTTTCCGTGGAAGCTCGTCGTCAAGGAGGATGAAGTTTCTAGCGTCGCCGTTGTTCGGAAGACAGCCGACGCCGGCGATGTTCTCGTCGAGTAGAATGAGGTGTGGAGATCCGGAGGCATTGCTGTCGCCGGAGAGGTATGGGAGAGAAGTGAATATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42273.p1 GENE.S_Transcript_42273~~S_Transcript_42273.p1 ORF type:complete len:407 (+),score=-25.88,zf-RING_2|PF13639.2|8.8e-15,zf-RING_11|PF17123.1|3.4e-11,zf-rbx1|PF12678.3|4.5e-08,zf-C3HC4|PF00097.21|5.3e-06,zf-C3HC4_2|PF13923.2|5.8e-06 S_Transcript_42273:542-1762(+)
MAAKPPDHHHNNHPAAAPTTPSTSLLINQSPPSKLPIDFSPPLIAMVVVAAAAFLLVTYSRLISRHLFPPFLRLLRRYRRWRRLRRLRRAHFPPSDLGSPPPPYESSDGFYFYSPYGLDESVIKTIPLTIFELPKSNNKLTSKLGLKIEEEFNDCAVCLLEFEDGDYIRTLPLCSHSFHVDCIDMWLQSHATCPLCRSGVFLPPPIVDSPLTPLMASRIRPSLDEGFLLESIFLEPLPEGPEQNSGEIQPVIRSDDFFSTQSEDQRPREHDFLLKRSYSFGFERSFPSERIVLEAATTPYHQNRRRSFFWTKRPSSSTPFSSIAKSRVFSFRLKSPGGFFRRKTFFPFSESSASFRGSSSSRRMKFLASPLFGRQPTPAMFSSSRMRCGDPEALLSPERYGREVNI*

Click here to download the sequence:
Link to NCBI Protein BLAST