Transcript Information: S_Transcript_422888.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value9E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16950956200752
Replicate 20
Replicate 30.11746965658344
Condition 2: 8 Hour
Replicate 10.27166102314819
Replicate 20.99747095845915
Replicate 30.4073091899041
Condition 3: 24 Hour
Replicate 10.41741815587123
Replicate 20.28871097549487
Replicate 30.32129992872759


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_422888.p1 GENE.S_Transcript_422888~~S_Transcript_422888.p1 ORF type:5prime_partial len:157 (+),score=11.98,RVT_1|PF00078.23|1.6e-21 S_Transcript_422888:2-472(+)
TTCTTTCATTCCGGCTACATTCTAAAGGAGATGAATCACACCTTTATAACTCTGATTCCTATGCCAGAGAAAGGTAACAAGGTAACTGATTTCAGACCTATTTCTTTATGTAATGTTTCCTATAAAATTATGTCTACGTTCTTAGCAAACAGGCTGATGCCATATTTGAATGATATCATTACCCCTTTTCAATCATCATTTATTCCTAGGAGACTTATTACTGATAATTCTATCATGATTAATGAAATCCTTCATACCATGAATAAGAGTACTTCTAAGGAAAGTTTGATGGCTATAAAAGTGGATATGGCTAAAACCTATGACAAGGTGGAATGCGGTTTCTTGTTGAATATTTTGAAGGTATTGTGGTGTTCTGAGAAGTTTACTCAGTTGATTGATCAATGCATATCTACCTCTTCCTTCTCTCTTCCGATTAATGGAAAATCTCATGATTTTTTCAAGCCTAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_422888.p1 GENE.S_Transcript_422888~~S_Transcript_422888.p1 ORF type:5prime_partial len:157 (+),score=11.98,RVT_1|PF00078.23|1.6e-21 S_Transcript_422888:2-472(+)
FFHSGYILKEMNHTFITLIPMPEKGNKVTDFRPISLCNVSYKIMSTFLANRLMPYLNDIITPFQSSFIPRRLITDNSIMINEILHTMNKSTSKESLMAIKVDMAKTYDKVECGFLLNILKVLWCSEKFTQLIDQCISTSSFSLPINGKSHDFFKPS*

Click here to download the sequence:
Link to NCBI Protein BLAST