Transcript Information: S_Transcript_422938.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44355002058634
Replicate 20
Replicate 30.23053420104501
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.091020347877476
Replicate 20.094432548234781
Replicate 30.21018370337597


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_422938.p1 GENE.S_Transcript_422938~~S_Transcript_422938.p1 ORF type:internal len:240 (+),score=33.95,RVT_1|PF00078.23|2.6e-15 S_Transcript_422938:3-719(+)
GTGAGCATGATCATGCGTTGTGTGACCTCCCCTTCCTTTTCAGTGTTAATTAATGGGTCACCTACCGATACTTTCAAACCCCAAAGGGGCATTCGGCAAGGTGACCCTCTCTCTCCTTACTTGTTCATTATATGTGCAGAGGCCTTCTCTAGTCTTTTGGAGATGGAGGGGCAGAGAAAAGAACTTAAAGGAATCAGAATATGCAGGCGAGCCCCAGAGGTTTCACATCTTCTATTTGCGGATGATAGTGTTGTTTTTGGTCGGGCTAGACCATCAGATGTGGAGGCTATAAAGAGAGTGTTGTTTATATATGAAGCGGCATCAGGTCAAAAAATAAATCTTGCCAAGTCGGAGGTCATATTCAGCTCGAATGTATCAACTGCTATTAGAGGCCAGATAAGCTCAAGCTTAAAAGTGCAAAAGGTGGAAGGCCTGTCTAAATACTTAGGCATGCCCACACGAGTTGGCAGATCAAGGAATGTTGTTTTTAACCCTCTTAAAGATCGGATTTGGAAGAAACTCCAGGGGTGGAAGCAAAAGGTTTTATCATTTGCTGGTAGAGAGATCCTGATAAAGGCTGTTGCCCAAGCGATCCCTACTTACATGATGAGTCTTTTCAAACTACCCAAGGCGTTTTACAAAAACATTCAAAGCATAATGGCGAAGTTTTGGTGGGGGTGCCGAGGAGAGGAGAGAAAGATACACTGGATGGCCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_422938.p1 GENE.S_Transcript_422938~~S_Transcript_422938.p1 ORF type:internal len:240 (+),score=33.95,RVT_1|PF00078.23|2.6e-15 S_Transcript_422938:3-719(+)
VSMIMRCVTSPSFSVLINGSPTDTFKPQRGIRQGDPLSPYLFIICAEAFSSLLEMEGQRKELKGIRICRRAPEVSHLLFADDSVVFGRARPSDVEAIKRVLFIYEAASGQKINLAKSEVIFSSNVSTAIRGQISSSLKVQKVEGLSKYLGMPTRVGRSRNVVFNPLKDRIWKKLQGWKQKVLSFAGREILIKAVAQAIPTYMMSLFKLPKAFYKNIQSIMAKFWWGCRGEERKIHWMAW

Click here to download the sequence:
Link to NCBI Protein BLAST