Transcript Information: S_Transcript_422942.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4210825902281
Replicate 20.42840368072844
Replicate 30.35811138026409
Condition 2: 8 Hour
Replicate 10.20704262443818
Replicate 20.21720241397793
Replicate 30.93127489536326
Condition 3: 24 Hour
Replicate 10.31812937122224
Replicate 21.100185027978
Replicate 30.7346226525762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_422942.p1 GENE.S_Transcript_422942~~S_Transcript_422942.p1 ORF type:complete len:206 (-),score=28.49,RVT_1|PF00078.23|1.4e-15 S_Transcript_422942:150-767(-)
ATGAGCTGTCTTGCCTCAGTGTCCTATACAGTGTTGGTTAATGGTGAATCTGCTCCTAATTTCCAAGCTAAAAGAGGGTTAAGACAAGTTGATCCTTTATCGCCTTACCTCTTTGTTATTGCCATGGAGTACCTTTCTAGATGTTTGAAGGAAATGACTAGTAATCCTGATTTCAATTTCCACCCTAAATGCAGTAAGCAAAGGTTAACTCATTTAATTTTTGCTGACGATCTTATGCTTTTTGCAAGAGGAGATCTGGGGTCTATTCAGCTTGTTCAAGGAGCTTTTGATAAATTCTCCAAAGCTTCAGGGCTTATAGCTAATGTGAACAAGAGCTCTTTCTACAGTGGGGGACTGCCTGAAATTGAACAAAAGATATTTCTGGATTTTTTGAAGATGCAAGCAGGGGTGCTACCAGTTCGATATTTAGGCATACCCCTTTCATCTCAGAAGATCACAGTGGAACAATGTATGCCTTTAATTGATAAAATTACAGCAAAGGTGGCTAGTTGGACAATAAGATTTCTCTCCTATGCATGGAAAATCCAATTAGTACAAGCTGTGTTATTTGGAGTGTATGCTTTTTGGGCCCAAATCATTATTATTCCCAAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_422942.p1 GENE.S_Transcript_422942~~S_Transcript_422942.p1 ORF type:complete len:206 (-),score=28.49,RVT_1|PF00078.23|1.4e-15 S_Transcript_422942:150-767(-)
MSCLASVSYTVLVNGESAPNFQAKRGLRQVDPLSPYLFVIAMEYLSRCLKEMTSNPDFNFHPKCSKQRLTHLIFADDLMLFARGDLGSIQLVQGAFDKFSKASGLIANVNKSSFYSGGLPEIEQKIFLDFLKMQAGVLPVRYLGIPLSSQKITVEQCMPLIDKITAKVASWTIRFLSYAWKIQLVQAVLFGVYAFWAQIIIIPKK*

Click here to download the sequence:
Link to NCBI Protein BLAST