Transcript Information: S_Transcript_422945.p1


Annotated TAIR IDAT4G28890.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14256437-14257735 | Reverse length=432
E-Value2.5E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35171367271164
Replicate 20.19438581107943
Replicate 30.16249106681586
Condition 2: 8 Hour
Replicate 10.18788890147254
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.22222065555168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_422945.p1 GENE.S_Transcript_422945~~S_Transcript_422945.p1 ORF type:internal len:227 (+),score=21.05,zf-RING_2|PF13639.2|3.4e-13,zf-RING_11|PF17123.1|6e-11,zf-rbx1|PF12678.3|5.5e-08,zf-C3HC4|PF00097.21|2.6e-07,zf-C3HC4_2|PF13923.2|4.3e-06 S_Transcript_422945:2-679(+)
TTACCAACTCTCAAACTAACTTATCTCCTTCCTTCCTTCCCACAACAAGTACATGACCAACAAAACAAAACCTCTTGCATAATCAATCCAAATTTGTTAAGCATGAATAAGTATGTCGTGTTTATATTGCTAATTTCGATTTCGCTCCAATTGGTGAAAGCTCAAGATGATGAGAAAAAAGTGCCAACTTCAGCTAATTTCCAACCAAGCTTATTTGTGGTCATAGGTGTTCTGTCTTTCATGTTTTCCATAACATTTGCTCTTCTAATGTACGCCAAATTCTGCCACCTGCAACCAACGGCCATCCACAGCCTTAACCGCCAAGATAACGACATGTTTGGCAGCAACACTAGATTCTCAGGCCTAGACAAGACAGTAGTTGAATCACTCCCCTTTTTCAGATTTTCTTCCCTTAAAGGATCCAAACAAGGCCTTCAATGCTCAGTTTGCCTAGCTGAGTTTGGTGAATCTGAGGTCCTACGTTTGCTTCCCAAATGTAAACATGGTTTCCACATTGAATGCATTGATGAGTGGCTTGACAATCACTCCACTTGTCCCCTTTGTAGGATCAAAGTCACCCCTCAGGATCTCGACACCTTCATCAACTCGAGCAGTCTCCGATTAGCAGGGGATCCTGCTACCCCTGGCTCTGCTGTGAACACAAATTTTGAATCTTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_422945.p1 GENE.S_Transcript_422945~~S_Transcript_422945.p1 ORF type:internal len:227 (+),score=21.05,zf-RING_2|PF13639.2|3.4e-13,zf-RING_11|PF17123.1|6e-11,zf-rbx1|PF12678.3|5.5e-08,zf-C3HC4|PF00097.21|2.6e-07,zf-C3HC4_2|PF13923.2|4.3e-06 S_Transcript_422945:2-679(+)
LPTLKLTYLLPSFPQQVHDQQNKTSCIINPNLLSMNKYVVFILLISISLQLVKAQDDEKKVPTSANFQPSLFVVIGVLSFMFSITFALLMYAKFCHLQPTAIHSLNRQDNDMFGSNTRFSGLDKTVVESLPFFRFSSLKGSKQGLQCSVCLAEFGESEVLRLLPKCKHGFHIECIDEWLDNHSTCPLCRIKVTPQDLDTFINSSSLRLAGDPATPGSAVNTNFESS

Click here to download the sequence:
Link to NCBI Protein BLAST