Transcript Information: S_Transcript_422971.p1


Annotated TAIR IDAT5G56960.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23038703-23041174 | Reverse length=466
E-Value2.8E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.40358761385698
Replicate 30.14994094376911
Condition 2: 8 Hour
Replicate 10.1300328677874
Replicate 20.22735618536308
Replicate 30.12997468051818
Condition 3: 24 Hour
Replicate 10.17760067878532
Replicate 20.13819397302651
Replicate 30.30758590737947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_422971.p1 GENE.S_Transcript_422971~~S_Transcript_422971.p1 ORF type:5prime_partial len:492 (+),score=101.26,HLH|PF00010.22|2.4e+03,HLH|PF00010.22|3.2e-11 S_Transcript_422971:2-1477(+)
TTAATAATTTTCTTGTATTGCATAGAGGGTTACTACAGCGACGAGACTGCAAGCCAGCTAGTTGCAACCAGCTCTTCTTCTGGGTCGATTGCTCGGAGATTTTTCGACGAGTATAAAGCATCATTTATCACTGTTGGAAATGACTTGGTACCTGGACTTGCATCCAAGCACAGGAATCCTTACTTGGAGCTCCAGGAATTAGACCTTTTGAGGCTTGCATCTGTTGAATCACAACGCCAATTCTACAAGGAAGCAAGGATAAAGAATGCAGTGTTCTTGGGGTGTGAAAGAGGAGAGATAGAACTTGGCATGCCTTACATCCCACAGATGAGCTTGGAGATAAAGATGCAAAACATATTCCCAGAAGACTTTGCAAGACAACATTCCTCTCCAATGGTGCATTCAAACATACCACCACCACCACCAGAACAAAAACAACAACAACAGAGTTGCAGGGCTTCACCTTCATCATCTTTCTCATTAGGCAGCCCTGAGTACTCATTACTCTTTTATGCAATTCCGAGCTCTTCAAATCTATACCTTCAAGAGCAATGTACAACTACAACCAAAACACTAACAATTCCCATCACAACAACCACCAATGATCTCCTCATCCCTTTCCCTAGTCAAGAAAGCACAGACGCCGCCCTCACAAGGGCTTATTTGGCTATATTGTCTGCTTCTCCTTCATCTTCCTCAGCTTCATCACAACAAAAACAACAACAACAAGAAGCTAGTGCCTTCAAGAGATATCCAACAGCTGGCTTAAGGCCAATAATTGGGTCTAGTGATCTGAGGAGACAAACTATGCTTAAAAGAGCAATTGCTTATTTTAGAGGGCTCAATGACAGGAGATTGCAAGAGCAACAAGCTTTGATCGGAAGTCGCCCTACGAGTACTCAGTTGCACCACATGATATCTGAGAGAAGGAGAAGAGAGAAAATCAATGAGAGCTTCCAGGCTTTGAGATCCTTGCTCCCTCCAGCCACCAAGAAAGACAAAGCATCAGTGCTAAGAACTACAAAGGAGTACTTAAGCTCCATAAAATCTCAACTCTCAGAGCTAAGTAAAAGGAACGAATTCTTGGAGGCACAACTCTTTCCTAGGAGCAAGAAGACCACACCAACCACAACTAAACAAGTTGAAATCTCTACAAATGAAAGGCTAAGTGTTTGGATTACACCAATCTCTGAATCAACATCAGTAGATCATCACAGATTGGTGGACTTGCAAGTGGCTTTGAGAGGACAGTATCCAGCTACCAATCTGCTTATTAGGGTTTTGGAATTTCTAAACCAAGTTAGAGAAGTATGTTTGATTTCAATGGAATCTCGAACTCTTCAACGACAAACAGTAGGAGATCATCCAAGTCCAACAAGTTGGGCCACCTTCAGGCTGAGAATTGAGGGGAGCGAATGGGATGAGTCAGCCTTCAAAGAAGCAGTCAGAAGAATTCTTGCTGACTTGGCACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_422971.p1 GENE.S_Transcript_422971~~S_Transcript_422971.p1 ORF type:5prime_partial len:492 (+),score=101.26,HLH|PF00010.22|2.4e+03,HLH|PF00010.22|3.2e-11 S_Transcript_422971:2-1477(+)
LIIFLYCIEGYYSDETASQLVATSSSSGSIARRFFDEYKASFITVGNDLVPGLASKHRNPYLELQELDLLRLASVESQRQFYKEARIKNAVFLGCERGEIELGMPYIPQMSLEIKMQNIFPEDFARQHSSPMVHSNIPPPPPEQKQQQQSCRASPSSSFSLGSPEYSLLFYAIPSSSNLYLQEQCTTTTKTLTIPITTTTNDLLIPFPSQESTDAALTRAYLAILSASPSSSSASSQQKQQQQEASAFKRYPTAGLRPIIGSSDLRRQTMLKRAIAYFRGLNDRRLQEQQALIGSRPTSTQLHHMISERRRREKINESFQALRSLLPPATKKDKASVLRTTKEYLSSIKSQLSELSKRNEFLEAQLFPRSKKTTPTTTKQVEISTNERLSVWITPISESTSVDHHRLVDLQVALRGQYPATNLLIRVLEFLNQVREVCLISMESRTLQRQTVGDHPSPTSWATFRLRIEGSEWDESAFKEAVRRILADLAQ*

Click here to download the sequence:
Link to NCBI Protein BLAST