Transcript Information: S_Transcript_42311.p1


Annotated TAIR IDAT1G18060.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6212065-6213314 | Reverse length=226
E-Value1.2E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.617383421286
Replicate 247.537350696089
Replicate 350.765057054859
Condition 2: 8 Hour
Replicate 159.286050744194
Replicate 261.042088728326
Replicate 352.740241496861
Condition 3: 24 Hour
Replicate 150.445916514362
Replicate 251.1688117033
Replicate 359.804847558523


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42311.p1 GENE.S_Transcript_42311~~S_Transcript_42311.p1 ORF type:5prime_partial len:291 (+),score=53.52 S_Transcript_42311:1-873(+)
GTTAAAAAAAGTGTGGGCTTTTTTGGAAGGATGACGGACCACCACAACCACACCCCAGCAAAGCCAAGAGGAGAGAGGATGTGGTCAGAGTTACTAGGCTTAACGCCACCAACAACCACCACCAGCTGTGCCTGTGCCTGTGTTAATCACTACCGCCGTCCACTAAATCAGCCTCATTCTCGTCTCAGCTTCACTGCCACCCCTCAACTTGGTTTTTCTTCGAAATCCACCAGCTTGAAACTGAAACTGAAAGCATCATCATCAGTTGAACAATTTGACAAGGACAATTCTACCACTCTCGTGTTCCAGGAAAATGAATATCAGCCCAATAAAGCAACTGAAGTTGAGGAGAGTATTAAAGTTTTGAAAAATGCTGCAAAAACAAGGAAGGTCCCAAAGAGCGATGTGTTATCAGTTTTTGCTGTGATTGAGAAAGCAAAACTTGATCCTGCGAACTTCCTTGAAACGCTGGGGGGATCAAAATCACCAGGGAGGACCTGGATGCTTATTTTTACTGCTGAGAAAAACTTGAAGGGTGGACGGTATTTCCCTCTCACTGCTGTTCAGAGATTTGATGCAGAGGCAAAACGGATTGAAAATGGCGTGTATCTGGGACCTCTAGGATGCTTGACATTTGAAGGTGGATTTTCCTTGAAAAAAAGAATATTGGCATTCATTTTTGAGCGAATTCGTATTAAAATCGGACCCTTGCAGCCTTTAGAGGTAAGTCTAGGAAATGAAGACAAAAGGGAGCCAAACACCAAAGATCCATTTTTCATATGGTTTTATGTTGATGAGGAAATAGCAGTGGCCCGTGGGAGAAGTGGAGGAACAGCATTTTGGTGCCGTTGTCGCCGAGTGAATAATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42311.p1 GENE.S_Transcript_42311~~S_Transcript_42311.p1 ORF type:5prime_partial len:291 (+),score=53.52 S_Transcript_42311:1-873(+)
VKKSVGFFGRMTDHHNHTPAKPRGERMWSELLGLTPPTTTTSCACACVNHYRRPLNQPHSRLSFTATPQLGFSSKSTSLKLKLKASSSVEQFDKDNSTTLVFQENEYQPNKATEVEESIKVLKNAAKTRKVPKSDVLSVFAVIEKAKLDPANFLETLGGSKSPGRTWMLIFTAEKNLKGGRYFPLTAVQRFDAEAKRIENGVYLGPLGCLTFEGGFSLKKRILAFIFERIRIKIGPLQPLEVSLGNEDKREPNTKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNNS*

Click here to download the sequence:
Link to NCBI Protein BLAST