Transcript Information: S_Transcript_423141.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10004887682399
Replicate 20.24882845365618
Replicate 30
Condition 2: 8 Hour
Replicate 10.40085320144987
Replicate 20.25231408240293
Replicate 30
Condition 3: 24 Hour
Replicate 10.16424724429018
Replicate 20.2556068974776
Replicate 30.47409857904354


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_423141.p1 GENE.S_Transcript_423141~~S_Transcript_423141.p1 ORF type:5prime_partial len:266 (+),score=34.15,zf-RVT|PF13966.2|1.3e-15 S_Transcript_423141:2-799(+)
TGTTCGCTGCTGGAATTCGGATTCTCAAAGGAGACCGAACACGGCCCGTGTTCACCAACACGGTGGGGCCGTGTTACCTGCTGGTCACCAACGTCAAGCCATTTTTCCAACATTAGTTATTATCCAGGGCTTGATCAAACTAGGCCTGTTCATGGTTATTATTGGGATTTTACCATGAAGAAGGATAAAGTCTGGATTAAATGGCTGCATGGTTATTATCCAGGGCTTGATCAAACTAGGCCTGTTCATGGTCAACTATCATGGATGTTGAAAAAGATTCTTGAGAGAAAAGATGAGTTTGCTGCTATTTCTGCCAATCTCAAAAAGGATGCAAAAATCAGCAATATTTATGAGATTATGGTGGAGGATAGGCCAAAGGTAAAGTGGTATAACATGGTTTGGAAGAGCTTTGCTAGGACTAGAGCAAAGTTTATTCTATGGTTGGCTATTCTACAAAGGTTAATGACAAAAGACAGAATTCAGAAATGGGATCCTACCTGCGATGTGCTGTGTCCTCTTTGTAAGATAGGACCAGAAAGCTGTGAGCACTTTTTTGTTCATTGTTCTTTCTGTCTGGAGGTAATTGCTGCTTTGATGAAAGGACTAAAAATCAATTGGAGCCCTGCTGGGAACTGGGATCAAGCATTAGCAGATTGGCAGAAGCTGTGCAAAGGAAAGCCCTCTAGAGCACAGTGTGCTAAAGCTATTCTGGCTAAGTTCAGTTATTGCAATTTAGTGGGAAAGAAACCAAAGAGTCTTTGCTCAGAGCAACAGAAGTGCGGTGCAGATTGCATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_423141.p1 GENE.S_Transcript_423141~~S_Transcript_423141.p1 ORF type:5prime_partial len:266 (+),score=34.15,zf-RVT|PF13966.2|1.3e-15 S_Transcript_423141:2-799(+)
CSLLEFGFSKETEHGPCSPTRWGRVTCWSPTSSHFSNISYYPGLDQTRPVHGYYWDFTMKKDKVWIKWLHGYYPGLDQTRPVHGQLSWMLKKILERKDEFAAISANLKKDAKISNIYEIMVEDRPKVKWYNMVWKSFARTRAKFILWLAILQRLMTKDRIQKWDPTCDVLCPLCKIGPESCEHFFVHCSFCLEVIAALMKGLKINWSPAGNWDQALADWQKLCKGKPSRAQCAKAILAKFSYCNLVGKKPKSLCSEQQKCGADCI*

Click here to download the sequence:
Link to NCBI Protein BLAST