Transcript Information: S_Transcript_42322.p1


Annotated TAIR IDAT4G18480.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)CHLI1, CH42, CH-42, CHL11, CHLI-1
Annotation TypeOrtholog
Chromosome Positionchr4:10201897-10203361 | Reverse length=424
E-Value8.4E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1422.28478555681
Replicate 2486.37237026909
Replicate 3535.49334415788
Condition 2: 8 Hour
Replicate 1317.66261084694
Replicate 2332.93330304274
Replicate 3342.81728429477
Condition 3: 24 Hour
Replicate 1481.10386429876
Replicate 2508.78381732623
Replicate 3506.94520456808


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42322.p1 GENE.S_Transcript_42322~~S_Transcript_42322.p1 ORF type:complete len:423 (+),score=118.00,Mg_chelatase|PF01078.17|0.33,Mg_chelatase|PF01078.17|2.2e-07,MCM|PF00493.19|5.8,MCM|PF00493.19|4.7e-06,AAA_5|PF07728.10|0.95,AAA_5|PF07728.10|0.0036 S_Transcript_42322:170-1438(+)
ATGGCTGCCCTTCTGAGCTCCTCTTCTTCTTCTTCTTTATTCACTTCAACCCGTCTTTCTTCTCTTTCCCCCAAGTTTTCTTCTTCCCCTATTTCTGTTTCAGGGAAGTTCAATTGGAGAAAGTTCTATGGTGGTATTGGGATTCCTGTGAAGAAGAGTAGGTCTCAGCTTAACTTTTCTGTTTCCAATGTTGCCACTGAAGTTAGTCCCACTGAACAGGCCCCAAGGGTTGCAACAGAAAGCCAAAGACCAGTGTTCCCATTTGCAGCTATAGTTGGGCAAGATGAGATGAAACTTTGCCTTTTGTTGAATGTTATTGACCCTAAGATTGGGGGTGTTATGATCATGGGTGACAGGGGTACCGGCAAATCCACCACTGTCCGGTCATTGGTCGATTTGCTCCCGGAAATTAAGGTCGTCTCAGGGGACCCATTTAACTCTGACCCCGAAGATCCTGAGGTGATGGGCATGGAAGTGAGGGAGAAGGCTCTGAAAGGAGAATCTCTTACTGTTGTCATGACCAAAATCAATATGGTTGATTTGCCACTAGGTGCTACTGAGGATAGGGTTTGTGGAACGATTGATATTGAGAAGGCTTTAACGGAGGGTGTCAAGGCGTTTGAGCCTGGGCTTCTTGCTAAGGCTAACCGAGGGATTCTATATGTTGATGAGGTCAATCTTTTGGATGACCATTTGGTGGATGTTCTTCTGGATTCTGCTGCTTCAGGGTGGAATACTGTTGAGAGAGAAGGTATTTCCATCTCCCATCCTGCTCGGTTTATCCTGATTGGCTCGGGAAACCCTGAAGAAGGAGAACTCAGGCCTCAGTTACTTGATCGTTTTGGAATGCATGCTCAAGTTGGAACTGTGAGGGATGCAGAGCTTAGGGTGAAGATTGTGGAGGAGCGGGCTCGCTTTGATAGGAATCCTAAGGAGTTCCGAGAATCTTACAAGGCTGAGCAAGAAAAGCTACAGGACCAAATTTCATCCGCTAGGAGCAACCTTTCTGCTGTTCAGATTGATCATGATCTCCGTGTTAAAATCTCAAAGGTTTGTGCTGAGCTGAATGTGGATGGGTTGCGAGGTGATATTGTAACAAATAGGGCAGCGAGGGCTTTGGCCTCACTAAAGGGAAGGGATCAGGTGACTGCAGAAGATATCGCTACCGTCATTCCTAACTGTCTAAGACATCGGCTAAGGAAAGATCCTTTGGAATCTATTGATTCAGGTTTGCTCGTTATTGAGAAGTTTTATGAGGTATTTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42322.p1 GENE.S_Transcript_42322~~S_Transcript_42322.p1 ORF type:complete len:423 (+),score=118.00,Mg_chelatase|PF01078.17|0.33,Mg_chelatase|PF01078.17|2.2e-07,MCM|PF00493.19|5.8,MCM|PF00493.19|4.7e-06,AAA_5|PF07728.10|0.95,AAA_5|PF07728.10|0.0036 S_Transcript_42322:170-1438(+)
MAALLSSSSSSSLFTSTRLSSLSPKFSSSPISVSGKFNWRKFYGGIGIPVKKSRSQLNFSVSNVATEVSPTEQAPRVATESQRPVFPFAAIVGQDEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVSGDPFNSDPEDPEVMGMEVREKALKGESLTVVMTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDRNPKEFRESYKAEQEKLQDQISSARSNLSAVQIDHDLRVKISKVCAELNVDGLRGDIVTNRAARALASLKGRDQVTAEDIATVIPNCLRHRLRKDPLESIDSGLLVIEKFYEVFS*

Click here to download the sequence:
Link to NCBI Protein BLAST