Transcript Information: S_Transcript_423227.p1


Annotated TAIR IDAT5G22790.1
Annotated Gene Namereticulata-related 1
Annotated Gene Symbol(s)RER1
Annotation TypeHomolog
Chromosome Positionchr5:7599395-7601573 | Reverse length=433
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.10133371474506
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.49810574893071
Replicate 30.13858266156657


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_423227.p1 GENE.S_Transcript_423227~~S_Transcript_423227.p1 ORF type:internal len:182 (+),score=-28.24,DUF3411|PF11891.4|5.4e-14 S_Transcript_423227:2-544(+)
CCAAACAACGCGTTTGAGCGCAGCACACCGACGCGGAACTTCATCCGGCGGCAGCGCGTGTCGTCCGTGGTGGCCAAGGGCGTGGAGGTGTCCGCGGTGCACGCAATCGCGGGCGGCACCTCTGCCGCGCTGCAGCACTGCGTCTCGCTCGCGCACCAGTCGCGCGACAAGCGCTACCGGCCCGCGACGCCGATACCCGGCATCTCGCGCGCCGCAGGCGGCATGGGCGTCTACGGCGGCCTTGCTGCGAACAGCCGCCTGCAGGCGGCTGCAGGCCTGGAGCGCGTGCTACTCGAGCACGCAAAGGTGAGCACAACATGGCAGGTGATTGGCCTGGCGACAGCATTCCGCGGCATCACGCAGTTTGCGCTCGAGAATCCGTGGGGCTGGGGGCCCAATGAGGTCACGGCGCTGTCGCGGCCTGCGCTGCAGGGCACGCCGGTGCATCATGTGCGGCCGCGGCGGCGGCGGCGGGTAGTGAAGCGCTCGGCGCCAACGCAGCAGCAACAGCGGGTAGCAGCTGGGCAGCAGGGTAACGAAGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_423227.p1 GENE.S_Transcript_423227~~S_Transcript_423227.p1 ORF type:internal len:182 (+),score=-28.24,DUF3411|PF11891.4|5.4e-14 S_Transcript_423227:2-544(+)
PNNAFERSTPTRNFIRRQRVSSVVAKGVEVSAVHAIAGGTSAALQHCVSLAHQSRDKRYRPATPIPGISRAAGGMGVYGGLAANSRLQAAAGLERVLLEHAKVSTTWQVIGLATAFRGITQFALENPWGWGPNEVTALSRPALQGTPVHHVRPRRRRRVVKRSAPTQQQQRVAAGQQGNEA

Click here to download the sequence:
Link to NCBI Protein BLAST