Transcript Information: S_Transcript_42348.p1


Annotated TAIR IDAT1G17680.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6076388-6082160 | Forward length=896
E-Value1.2E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.31932700956
Replicate 212.536214474678
Replicate 312.222522195039
Condition 2: 8 Hour
Replicate 117.316858302634
Replicate 217.541836205156
Replicate 313.71449271255
Condition 3: 24 Hour
Replicate 112.083904401349
Replicate 211.490138629469
Replicate 313.112212128976


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42348.p1 GENE.S_Transcript_42348~~S_Transcript_42348.p1 ORF type:complete len:931 (+),score=196.07,TPR_11|PF13414.2|7.1e-07,TPR_11|PF13414.2|4.4e-05,TPR_11|PF13414.2|0.16,TPR_11|PF13414.2|0.19,TPR_11|PF13414.2|0.29,TPR_11|PF13414.2|8.7,TPR_11|PF13414.2|8.1e+02,TPR_11|PF13414.2|0.63,TPR_8|PF13181.2|6.7,TPR_8|PF13181.2|0.027,TPR_8|PF13181.2|21,TPR_8|PF13181.2|0.4,TPR_8|PF13181.2|2.7,TPR_8|PF13181.2|2.7e+02,TPR_8|PF13181.2|66,TPR_8|PF13181.2|35,TPR_8|PF13181.2|2.4,TPR_8|PF13181.2|9.2e+02,TPR_8|PF13181.2|9.5e+03,TPR_8|PF13181.2|0.011,TPR_8|PF13181.2|6.7e+03,TPR_16|PF13432.2|0.00011,TPR_16|PF13432.2|8.8e-05,TPR_16|PF13432.2|4.5e+03,TPR_16|PF13432.2|23,TPR_16|PF13432.2|7.7,TPR_16|PF13432.2|5e+03,TPR_16|PF13432.2|8.7e+03,TPR_16|PF13432.2|48,TPR_16|PF13432.2|27,TPR_16|PF13432.2|8.1e+02,TPR_2|PF07719.13|0.29,TPR_2|PF07719.13|0.033,TPR_2|PF07719.13|31,TPR_2|PF07719.13|32,TPR_2|PF07719.13|3.3e+02,TPR_2|PF07719.13|20,TPR_2|PF07719.13|0.39,TPR_2|PF07719.13|3.4,TPR_2|PF07719.13|2e+02,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|2.3e+03,TPR_2|PF07719.13|4.6e+02,TPR_2|PF07719.13|0.032,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|0.0028,TPR_19|PF14559.2|0.02,TPR_19|PF14559.2|16,TPR_19|PF14559.2|31,TPR_19|PF14559.2|8.5e-05,TPR_19|PF14559.2|5.5e+02,TPR_19|PF14559.2|4.2e+03,TPR_19|PF14559.2|8.2e+02,TPR_1|PF00515.24|1,TPR_1|PF00515.24|0.16,TPR_1|PF00515.24|16,TPR_1|PF00515.24|4.2,TPR_1|PF00515.24|9.9e+02,TPR_1|PF00515.24|40,TPR_1|PF00515.24|2.6,TPR_1|PF00515.24|4.1,TPR_1|PF00515.24|0.31,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|8.8e+03,TPR_1|PF00515.24|0.0016,TPR_12|PF13424.2|0.00092,TPR_12|PF13424.2|2e+02,TPR_12|PF13424.2|0.0013,TPR_12|PF13424.2|52,TPR_12|PF13424.2|0.6,TPR_12|PF13424.2|0.057,TPR_12|PF13424.2|97,TPR_12|PF13424.2|2.6e+03,TPR_12|PF13424.2|0.0054,TPR_12|PF13424.2|1.8e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|0.14,TPR_14|PF13428.2|0.57,TPR_14|PF13428.2|0.82,TPR_14|PF13428.2|5.3,TPR_14|PF13428.2|4.9e+03,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|0.24,TPR_14|PF13428.2|3.2e+03,TPR_14|PF13428.2|8.9e+02,TPR_14|PF13428.2|1e+03,TPR_9|PF13371.2|0.49,TPR_9|PF13371.2|1.2e-05,TPR_9|PF13371.2|0.00043,TPR_9|PF13371.2|30,TPR_9|PF13371.2|3.3,TPR_9|PF13371.2|7.8e+03,TPR_9|PF13371.2|1.8e+03,TPR_7|PF13176.2|55,TPR_7|PF13176.2|7.9,TPR_7|PF13176.2|4.2e+02,TPR_7|PF13176.2|4.3e+02,TPR_7|PF13176.2|37,TPR_7|PF13176.2|2.3e+03,TPR_7|PF13176.2|2e+02,TPR_7|PF13176.2|77,TPR_7|PF13176.2|2.6e+02,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|4.8e+03,TPR_7|PF13176.2|0.0082,TPR_6|PF13174.2|76,TPR_6|PF13174.2|8.5e+02,TPR_6|PF13174.2|51,TPR_6|PF13174.2|2.2,TPR_6|PF13174.2|1e+02,TPR_6|PF13174.2|16,TPR_6|PF13174.2|14,TPR_6|PF13174.2|6.1e+02,TPR_17|PF13431.2|2.5e+03,TPR_17|PF13431.2|0.16,TPR_17|PF13431.2|7.3e+03,TPR_17|PF13431.2|2.4,TPR_17|PF13431.2|0.11,TPR_17|PF13431.2|2.1e+03,TPR_17|PF13431.2|7.2e+03,TPR_17|PF13431.2|13,TPR_17|PF13431.2|9.4e+02,TPR_15|PF13429.2|1.1e+03,TPR_15|PF13429.2|0.089,TPR_15|PF13429.2|7.5,TPR_15|PF13429.2|0.054,TPR_15|PF13429.2|7.9e+02,TPR_15|PF13429.2|5.6e+02,TPR_20|PF14561.2|58,TPR_20|PF14561.2|0.31,TPR_20|PF14561.2|2e+03,TPR_20|PF14561.2|1.5e+03,TPR_20|PF14561.2|0.17,TPR_10|PF13374.2|11,TPR_10|PF13374.2|98,TPR_10|PF13374.2|1.4e+03,TPR_10|PF13374.2|72,TPR_10|PF13374.2|8.5e+03,TPR_10|PF13374.2|1.9e+03,TPR_10|PF13374.2|2e+02,TPR_10|PF13374.2|6.5e+03,TPR_10|PF13374.2|2.8e+02,TPR_10|PF13374.2|1e+03,TPR_10|PF13374.2|0.13,TPR_10|PF13374.2|3.2e+03 S_Transcript_42348:515-3307(+)
ATGGAGAAGGTAGACGGTGGGACGAGTAACAACCTAGTGGTGGAAGAGGAGGAGAAGAGGGATGAAGAAGAAGAACGATACGCTGAAGAAGAAGATGAAAATGAAGAAGAAGAGGGAGAAGAAAATCAAGAAGAAGAAGAAGAAGAAGAGGGCGATGAGATGGAGTATGACGTTAGATTTGAAGGGGAGTTGAACCCTTTGGACATCATGAATAATGATACTTCTGGTGTCCAACTGTTTCAAGAATTGCAACGTCTTGAGTATGAAGCTTTACTTGACAAGAATAAGAAGCGAACGGCCCCTGATACTCCTAACCAAGGAGAAGGTTCAGTGAAGAGGCCTAGACAAGAGGAGACTTATGGAAAAACCTTTGATGAAATGATGGAGGAAATGTGTGGTACTAGGAAAAGATCCAGAAAGTCTAAAAAGAGAGGGAGACGTAAGGGATCTAGGAAAAAGCTCAGCCCTGAAATTACAAAAAAGCTTGGTGATGCTAATCTTCATTATGCACAAGGCCATTATGAAGAGGCAATCAGTGTGGCATATGAGGTGGTTCGGTTAGCACCGAATCTGCCCGATCCATATCATACACTTGGTCTTGTGCATAGTGCTATGGGTAACAAGAAGAAAGCCATGGACTTTTATCTGATTGCTGCATCACTAGCGCCAAAAGATTCATCTCTGTGGAAACTTCTTGTGACTTGGTTCATAGAAGAAGGAAAAATTGATGAAGCTTGGCATTGCTTAAAAAAAGCGATTAGAGCTGATCCGGGTGATATCTCTCTTAGATATTATCATGCTTCAATTTATATGGAGACGGGAGATCACCTGAAAGCCGCTGAATCATATTATCAGATAGCTCAAATCTGTCCAGATAATGTTGATGCTTTACGGACTACAGCAATGCTGTACAAGAAATGTGGTGACTTTGAGCGGTCTGTGAGCATCTTGGAGAACTACGTTGAAAATCATCCTCCTGAAGCTGATCTAACTGTGGTCGAGATGTTGGCTTCATTATACATGGAAAACAATGAGCATATAAAAGCTCTTCATCACATTGACCAGGCATACCAGGTTTACTGTGTTGGAAAGGAATTCCCATTGCATCTTACGATAAGAGAGGGCATATGTCATGCTCATCTTGGGAACATGGAGAAAGCAGAGATTTGTTTTGATCGTTTGCGAAGGGAAAATGGAAATCTCCAGATGGGTCTAATAATTGCAGCAGCGAACACATTAATGGATCTTCATAACTACGAGTCTGCATTGAAGTATTATCTGATGCTGGAAGTCTGTGCCTCAAACAATGAACTTATAAATGTCAAAATTGCTCGTTGTTACTCAGCTTTGAAAGAAACAACTTTAGCAATTCAGTTCTTCTACAGAGCATTACAAGCATGTGAAGATGATATTGATACCCGTTTAACTCTAGCTTCCCTTCTCCTTGAGGAAAATAGAGAAGAAGAAGCCATAGTATTGCTTTCACCTCCTCCTAATACAGTAAATGACACACAAACAGATAGACCTCAACCTTGGTGGTGTAATGTGAAAGTAAAGCTGAAATTGTCCCGCATTTATAATGCTAAGGGGGTGCTTGCGCCGTTTGTTGAAATAATTTACCCAATCATCCATGAGTCGTTGACAATTGATTTGCATCAAAAGGTGAAACAGAGAAGAGAGACCCCATCTAGTGAACTGAGAGAGAGAGTTAAAATTCTAGGTGATGAACAAACTGATTCTCTATTTGGTAATTTCAGACGTCCGGTTCCAAGGAATGACTTGGTGAAAGCCAACCGAGCTAAAGAAAAGCTTCGAAAGAAACAAACATGTAAAGAAGAGAAGAAGTCTGCCGCACTGGCTGCTGGACTTGATTGGGAAAGTGATGAATCAGATAATGAAGAACCGCAACAACCACTGAAGGAGCCTCCATTGCCTGATCTCTTCAAGGACGAGGAGCATTATGACCTCATCTCTGATTTATGCACAGCATTGACATCTCTGCGGAGGTATGGTGAGGCTCTTGAAATTATTAAACTCACTTTGAAAATAACTGACAAGACTTTGCCTGCTGACAAGAAGGAGAAATTTTGGTCTTTTGGTGCTCAAATATCATTGAATATCACTGATCCTTTTGATGGGTTTGACTATGTACGCTACATGGTTCAGCAGTGTCCACAGAGCATTCCTGCATGGAACTGTTACTACAAACTAGTCTTAAGATTAGAAAACCGGCTCTCAAAGCATAACAAGTTTCTACGGAAGATACGAGATGTACTGCACAAGGATCTAGTACCGCCCATGATTATTTACGGAAATCAATATACAATGATTAGTCATCACCAAGCAGCTGCAAGAGAGTACTTGGAAGCATATAAACAGATGCCAGAGTCCCCGTTGGTAAATCTATGTGTGGGCACTGCCTTAGTGAATTTAGCCCTTGGACATAGGCTTCAAAACAAGCACCAATGTGTTGCACAGGGTTTAGCATTCCTCTACAATAATCTGCGACTGTGTGAAAATAGCCAGGAATCCCTGTACAATATAGGCCGTGCGTTGCACCATGTTGGACTTTTCTCGTTGGCAGCTTCTTACTATGAGAAGGTCCTCGCAATTAATCAAGAAGACTGCCCTTTTCCAGAGGTCATTAAAGAGGTTAAAGATCCCTCAGAACGCCCAAAACCTGGATACTGTAGTCTTCGCAGAGAAGCAGCTTACAATTTGCACTTAATTTACAAGAGAAGTGGTGCTGTTGATCTTGCTAGGCAGGTACTGAAGGATTATTGTACCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42348.p1 GENE.S_Transcript_42348~~S_Transcript_42348.p1 ORF type:complete len:931 (+),score=196.07,TPR_11|PF13414.2|7.1e-07,TPR_11|PF13414.2|4.4e-05,TPR_11|PF13414.2|0.16,TPR_11|PF13414.2|0.19,TPR_11|PF13414.2|0.29,TPR_11|PF13414.2|8.7,TPR_11|PF13414.2|8.1e+02,TPR_11|PF13414.2|0.63,TPR_8|PF13181.2|6.7,TPR_8|PF13181.2|0.027,TPR_8|PF13181.2|21,TPR_8|PF13181.2|0.4,TPR_8|PF13181.2|2.7,TPR_8|PF13181.2|2.7e+02,TPR_8|PF13181.2|66,TPR_8|PF13181.2|35,TPR_8|PF13181.2|2.4,TPR_8|PF13181.2|9.2e+02,TPR_8|PF13181.2|9.5e+03,TPR_8|PF13181.2|0.011,TPR_8|PF13181.2|6.7e+03,TPR_16|PF13432.2|0.00011,TPR_16|PF13432.2|8.8e-05,TPR_16|PF13432.2|4.5e+03,TPR_16|PF13432.2|23,TPR_16|PF13432.2|7.7,TPR_16|PF13432.2|5e+03,TPR_16|PF13432.2|8.7e+03,TPR_16|PF13432.2|48,TPR_16|PF13432.2|27,TPR_16|PF13432.2|8.1e+02,TPR_2|PF07719.13|0.29,TPR_2|PF07719.13|0.033,TPR_2|PF07719.13|31,TPR_2|PF07719.13|32,TPR_2|PF07719.13|3.3e+02,TPR_2|PF07719.13|20,TPR_2|PF07719.13|0.39,TPR_2|PF07719.13|3.4,TPR_2|PF07719.13|2e+02,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|2.3e+03,TPR_2|PF07719.13|4.6e+02,TPR_2|PF07719.13|0.032,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|0.0028,TPR_19|PF14559.2|0.02,TPR_19|PF14559.2|16,TPR_19|PF14559.2|31,TPR_19|PF14559.2|8.5e-05,TPR_19|PF14559.2|5.5e+02,TPR_19|PF14559.2|4.2e+03,TPR_19|PF14559.2|8.2e+02,TPR_1|PF00515.24|1,TPR_1|PF00515.24|0.16,TPR_1|PF00515.24|16,TPR_1|PF00515.24|4.2,TPR_1|PF00515.24|9.9e+02,TPR_1|PF00515.24|40,TPR_1|PF00515.24|2.6,TPR_1|PF00515.24|4.1,TPR_1|PF00515.24|0.31,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|8.8e+03,TPR_1|PF00515.24|0.0016,TPR_12|PF13424.2|0.00092,TPR_12|PF13424.2|2e+02,TPR_12|PF13424.2|0.0013,TPR_12|PF13424.2|52,TPR_12|PF13424.2|0.6,TPR_12|PF13424.2|0.057,TPR_12|PF13424.2|97,TPR_12|PF13424.2|2.6e+03,TPR_12|PF13424.2|0.0054,TPR_12|PF13424.2|1.8e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|0.14,TPR_14|PF13428.2|0.57,TPR_14|PF13428.2|0.82,TPR_14|PF13428.2|5.3,TPR_14|PF13428.2|4.9e+03,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|0.24,TPR_14|PF13428.2|3.2e+03,TPR_14|PF13428.2|8.9e+02,TPR_14|PF13428.2|1e+03,TPR_9|PF13371.2|0.49,TPR_9|PF13371.2|1.2e-05,TPR_9|PF13371.2|0.00043,TPR_9|PF13371.2|30,TPR_9|PF13371.2|3.3,TPR_9|PF13371.2|7.8e+03,TPR_9|PF13371.2|1.8e+03,TPR_7|PF13176.2|55,TPR_7|PF13176.2|7.9,TPR_7|PF13176.2|4.2e+02,TPR_7|PF13176.2|4.3e+02,TPR_7|PF13176.2|37,TPR_7|PF13176.2|2.3e+03,TPR_7|PF13176.2|2e+02,TPR_7|PF13176.2|77,TPR_7|PF13176.2|2.6e+02,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|4.8e+03,TPR_7|PF13176.2|0.0082,TPR_6|PF13174.2|76,TPR_6|PF13174.2|8.5e+02,TPR_6|PF13174.2|51,TPR_6|PF13174.2|2.2,TPR_6|PF13174.2|1e+02,TPR_6|PF13174.2|16,TPR_6|PF13174.2|14,TPR_6|PF13174.2|6.1e+02,TPR_17|PF13431.2|2.5e+03,TPR_17|PF13431.2|0.16,TPR_17|PF13431.2|7.3e+03,TPR_17|PF13431.2|2.4,TPR_17|PF13431.2|0.11,TPR_17|PF13431.2|2.1e+03,TPR_17|PF13431.2|7.2e+03,TPR_17|PF13431.2|13,TPR_17|PF13431.2|9.4e+02,TPR_15|PF13429.2|1.1e+03,TPR_15|PF13429.2|0.089,TPR_15|PF13429.2|7.5,TPR_15|PF13429.2|0.054,TPR_15|PF13429.2|7.9e+02,TPR_15|PF13429.2|5.6e+02,TPR_20|PF14561.2|58,TPR_20|PF14561.2|0.31,TPR_20|PF14561.2|2e+03,TPR_20|PF14561.2|1.5e+03,TPR_20|PF14561.2|0.17,TPR_10|PF13374.2|11,TPR_10|PF13374.2|98,TPR_10|PF13374.2|1.4e+03,TPR_10|PF13374.2|72,TPR_10|PF13374.2|8.5e+03,TPR_10|PF13374.2|1.9e+03,TPR_10|PF13374.2|2e+02,TPR_10|PF13374.2|6.5e+03,TPR_10|PF13374.2|2.8e+02,TPR_10|PF13374.2|1e+03,TPR_10|PF13374.2|0.13,TPR_10|PF13374.2|3.2e+03 S_Transcript_42348:515-3307(+)
MEKVDGGTSNNLVVEEEEKRDEEEERYAEEEDENEEEEGEENQEEEEEEEGDEMEYDVRFEGELNPLDIMNNDTSGVQLFQELQRLEYEALLDKNKKRTAPDTPNQGEGSVKRPRQEETYGKTFDEMMEEMCGTRKRSRKSKKRGRRKGSRKKLSPEITKKLGDANLHYAQGHYEEAISVAYEVVRLAPNLPDPYHTLGLVHSAMGNKKKAMDFYLIAASLAPKDSSLWKLLVTWFIEEGKIDEAWHCLKKAIRADPGDISLRYYHASIYMETGDHLKAAESYYQIAQICPDNVDALRTTAMLYKKCGDFERSVSILENYVENHPPEADLTVVEMLASLYMENNEHIKALHHIDQAYQVYCVGKEFPLHLTIREGICHAHLGNMEKAEICFDRLRRENGNLQMGLIIAAANTLMDLHNYESALKYYLMLEVCASNNELINVKIARCYSALKETTLAIQFFYRALQACEDDIDTRLTLASLLLEENREEEAIVLLSPPPNTVNDTQTDRPQPWWCNVKVKLKLSRIYNAKGVLAPFVEIIYPIIHESLTIDLHQKVKQRRETPSSELRERVKILGDEQTDSLFGNFRRPVPRNDLVKANRAKEKLRKKQTCKEEKKSAALAAGLDWESDESDNEEPQQPLKEPPLPDLFKDEEHYDLISDLCTALTSLRRYGEALEIIKLTLKITDKTLPADKKEKFWSFGAQISLNITDPFDGFDYVRYMVQQCPQSIPAWNCYYKLVLRLENRLSKHNKFLRKIRDVLHKDLVPPMIIYGNQYTMISHHQAAAREYLEAYKQMPESPLVNLCVGTALVNLALGHRLQNKHQCVAQGLAFLYNNLRLCENSQESLYNIGRALHHVGLFSLAASYYEKVLAINQEDCPFPEVIKEVKDPSERPKPGYCSLRREAAYNLHLIYKRSGAVDLARQVLKDYCTI*

Click here to download the sequence:
Link to NCBI Protein BLAST