Transcript Information: S_Transcript_42350.p1


Annotated TAIR IDAT1G17680.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6076388-6082160 | Forward length=896
E-Value3E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.692379752525
Replicate 23.6097496003787
Replicate 32.8967648298849
Condition 2: 8 Hour
Replicate 15.3592603938345
Replicate 24.1288359400543
Replicate 33.0411353258416
Condition 3: 24 Hour
Replicate 16.2046331380353
Replicate 22.8774734593007
Replicate 33.0702226828217


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42350.p1 GENE.S_Transcript_42350~~S_Transcript_42350.p1 ORF type:3prime_partial len:764 (+),score=163.39,TPR_16|PF13432.2|8.8e-05,TPR_16|PF13432.2|6.9e-05,TPR_16|PF13432.2|6.1,TPR_16|PF13432.2|3.2e+03,TPR_16|PF13432.2|6.9e+03,TPR_16|PF13432.2|39,TPR_11|PF13414.2|5.5e-07,TPR_11|PF13414.2|3.4e-05,TPR_11|PF13414.2|0.22,TPR_11|PF13414.2|6.5e+02,TPR_11|PF13414.2|64,TPR_14|PF13428.2|6.2,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|0.45,TPR_14|PF13428.2|0.73,TPR_14|PF13428.2|3.2e+02,TPR_14|PF13428.2|0.18,TPR_14|PF13428.2|2.5e+03,TPR_8|PF13181.2|5.3,TPR_8|PF13181.2|0.022,TPR_8|PF13181.2|17,TPR_8|PF13181.2|0.32,TPR_8|PF13181.2|28,TPR_8|PF13181.2|1.9,TPR_8|PF13181.2|9.9e+02,TPR_8|PF13181.2|2.1e+03,TPR_8|PF13181.2|7.5e+03,TPR_19|PF14559.2|1.7,TPR_19|PF14559.2|0.0013,TPR_19|PF14559.2|35,TPR_19|PF14559.2|0.00042,TPR_19|PF14559.2|4.4e+02,TPR_19|PF14559.2|3.2e+03,TPR_1|PF00515.24|0.82,TPR_1|PF00515.24|0.13,TPR_1|PF00515.24|13,TPR_1|PF00515.24|3.4,TPR_1|PF00515.24|3.3,TPR_1|PF00515.24|0.25,TPR_1|PF00515.24|9.1e+02,TPR_1|PF00515.24|5.2e+03,TPR_2|PF07719.13|0.23,TPR_2|PF07719.13|0.026,TPR_2|PF07719.13|25,TPR_2|PF07719.13|26,TPR_2|PF07719.13|2.7,TPR_2|PF07719.13|1.6e+02,TPR_2|PF07719.13|6.4e+03,TPR_2|PF07719.13|1.7e+03,TPR_2|PF07719.13|3.4e+02,TPR_12|PF13424.2|0.00072,TPR_12|PF13424.2|1.6e+02,TPR_12|PF13424.2|2.3,TPR_12|PF13424.2|56,TPR_12|PF13424.2|0.033,TPR_12|PF13424.2|77,TPR_12|PF13424.2|2.2e+03,TPR_9|PF13371.2|0.38,TPR_9|PF13371.2|1.6e-05,TPR_9|PF13371.2|2.5,TPR_9|PF13371.2|6.3e+03,TPR_17|PF13431.2|2e+03,TPR_17|PF13431.2|0.13,TPR_17|PF13431.2|5.8e+03,TPR_17|PF13431.2|1.9,TPR_17|PF13431.2|81,TPR_17|PF13431.2|5.8e+03,TPR_17|PF13431.2|12,TPR_17|PF13431.2|1.2e+04,TPR_20|PF14561.2|46,TPR_20|PF14561.2|0.12,TPR_20|PF14561.2|0.18,TPR_15|PF13429.2|9.1e+02,TPR_15|PF13429.2|0.055,TPR_15|PF13429.2|0.044,TPR_15|PF13429.2|1.5e+03,TPR_15|PF13429.2|6.9e+02,TPR_15|PF13429.2|3.9e+02,ANAPC3|PF12895.3|0.0056,ANAPC3|PF12895.3|5.4,ANAPC3|PF12895.3|1.3,ANAPC3|PF12895.3|1.7e+03 S_Transcript_42350:515-2803(+)
ATGGAGAAGGTAGACGGTGGGACGAGTAACAACCTAGTGGTGGAAGAGGAGGAGAAGAGGGATGAAGAAGAAGAACGATACGCTGAAGAAGAAGATGAAAATGAAGAAGAAGAGGGAGAAGAAAATCAAGAAGAAGAAGAAGAAGAAGAGGGCGATGAGATGGAGTATGACGTTAGATTTGAAGGGGAGTTGAACCCTTTGGACATCATGAATAATGATACTTCTGGTGTCCAACTGTTTCAAGAATTGCAACGTCTTGAGTATGAAGCTTTACTTGACAAGAATAAGAAGCGAACGGCCCCTGATACTCCTAACCAAGGAGAAGGTTCAGTGAAGAGGCCTAGACAAGAGGAGACTTATGGAAAAACCTTTGATGAAATGATGGAGGAAATGTGTGGTACTAGGAAAAGATCCAGAAAGTCTAAAAAGAGAGGGAGACGTAAGGGATCTAGGAAAAAGCTCAGCCCTGAAATTACAAAAAAGCTTGGTGATGCTAATCTTCATTATGCACAAGGCCATTATGAAGAGGCAATCAGTGTGGCATATGAGGTGGTTCGGTTAGCACCGAATCTGCCCGATCCATATCATACACTTGGTCTTGTGCATAGTGCTATGGGTAACAAGAAGAAAGCCATGGACTTTTATCTGATTGCTGCATCACTAGCGCCAAAAGATTCATCTCTGTGGAAACTTCTTGTGACTTGGTTCATAGAAGAAGGAAAAATTGATGAAGCTTGGCATTGCTTAAAAAAAGCGATTAGAGCTGATCCGGGTGATATCTCTCTTAGATATTATCATGCTTCAATTTATATGGAGACGGGAGATCACCTGAAAGCCGCTGAATCATATTATCAGATAGCTCAAATCTGTCCAGATAATGTTGATGCTTTACGGACTACAGCAATGATTTGTTTTGATCGTTTGCGAAGGGAAAATGGAAATCTCCAGATGGGTCTAATAATTGCAGCAGCGAACACATTAATGGATCTTCATAACTACGAGTCTGCATTGAAGTATTATCTGATGCTGGAAGTCTGTGCCTCAAACAATGAACTTATAAATGTCAAAATTGCTCGTTGTTACTCAGCTTTGAAAGAAACAACTTTAGCAATTCAGTTCTTCTACAGAGCATTACAAGCATGTGAAGATGATATTGATACCCGTTTAACTCTAGCTTCCCTTCTCCTTGAGGAAAATAGAGAAGAAGAAGCCATATTATTGCTTTCACCTCCTCCTAATTCAGTAAATGGCACACAAACAGATAGACCTCAACCTTGGTGGTGTAATGTGAAAGTAAAGCTGAAATTGTCCTGCATTTATAATGCTAAGGGGATGCTTGCGCCCTTTGTTGAAATAATTTACCCAATCATCCATGAGTCGTTGACAATTGATTTGCATCAAAAGGTGAAACAGAGAAGAGAGACCCCATCTAGTGAACTGAGAGAGAGAGTTAAAATTCTAGGTGATGAACAAACTGATTCTCTATTTGGTAATTTCAGACGTCCGGTTCCAAGGAATGACTTGGTGAAAGCCAACCGAGCTAAAGAAAAGCTTCGAAAGAAACAAACATGTAAAGAAGAGAAGAAGTCTGCCGCACTGGCTGCTGGACTTGATTGGGAAAGTGATGAATCAGATAATGAAGAACCGCAACAACCACTGAAGGAGCCTCCATTGCCTGATCTCTTCAAGGACGAGGAGCATTATGACCTCATCTCTGATTTATGCACAGCATTGACATCTCTGCGGAGGTATGGTGAGGCTCTTGAAATTATTAAACTCACTTTGAAAATAACTGACAAGACTTTGCCTGCTGACAAGAAGGAGAAATTTTGGTCTTTTGGTGCTCAAATATCATTGAATATCACTGATCCTTTTGATGGGTTTGACTATGTACGCTACATGGTTCAGCAGTGTCCACAGAGCATTCCTGCATGGAACTGTTACTACAAACTAGTCTTAAGATTAGAAAACCGGCTCTCAAAGCATAACAAGTTTCTACGGAAGATACGAGATGTACTGCACAAGGATCTAGTACCGCCCATGATTATTTACGGAAATCAATATACAATGATTAGTCATCACCAAGCAGCTGCAAGAGAGTACTTGGAAGCATATAAACAGATGCCAGAGTCCCCGTTGGTAAATCTATGTGTGGGCACTGCCTTAGTGAATTTAGCCCTTGGACATAGGCTTCAAAACAAGCACCAATGTGTTGCACAGGGTTTAGCATTCCTCTACAATAATCTGCGACTGTGTGAAAATAGCCAGGAATCCCTGTACAATATAGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42350.p1 GENE.S_Transcript_42350~~S_Transcript_42350.p1 ORF type:3prime_partial len:764 (+),score=163.39,TPR_16|PF13432.2|8.8e-05,TPR_16|PF13432.2|6.9e-05,TPR_16|PF13432.2|6.1,TPR_16|PF13432.2|3.2e+03,TPR_16|PF13432.2|6.9e+03,TPR_16|PF13432.2|39,TPR_11|PF13414.2|5.5e-07,TPR_11|PF13414.2|3.4e-05,TPR_11|PF13414.2|0.22,TPR_11|PF13414.2|6.5e+02,TPR_11|PF13414.2|64,TPR_14|PF13428.2|6.2,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|0.45,TPR_14|PF13428.2|0.73,TPR_14|PF13428.2|3.2e+02,TPR_14|PF13428.2|0.18,TPR_14|PF13428.2|2.5e+03,TPR_8|PF13181.2|5.3,TPR_8|PF13181.2|0.022,TPR_8|PF13181.2|17,TPR_8|PF13181.2|0.32,TPR_8|PF13181.2|28,TPR_8|PF13181.2|1.9,TPR_8|PF13181.2|9.9e+02,TPR_8|PF13181.2|2.1e+03,TPR_8|PF13181.2|7.5e+03,TPR_19|PF14559.2|1.7,TPR_19|PF14559.2|0.0013,TPR_19|PF14559.2|35,TPR_19|PF14559.2|0.00042,TPR_19|PF14559.2|4.4e+02,TPR_19|PF14559.2|3.2e+03,TPR_1|PF00515.24|0.82,TPR_1|PF00515.24|0.13,TPR_1|PF00515.24|13,TPR_1|PF00515.24|3.4,TPR_1|PF00515.24|3.3,TPR_1|PF00515.24|0.25,TPR_1|PF00515.24|9.1e+02,TPR_1|PF00515.24|5.2e+03,TPR_2|PF07719.13|0.23,TPR_2|PF07719.13|0.026,TPR_2|PF07719.13|25,TPR_2|PF07719.13|26,TPR_2|PF07719.13|2.7,TPR_2|PF07719.13|1.6e+02,TPR_2|PF07719.13|6.4e+03,TPR_2|PF07719.13|1.7e+03,TPR_2|PF07719.13|3.4e+02,TPR_12|PF13424.2|0.00072,TPR_12|PF13424.2|1.6e+02,TPR_12|PF13424.2|2.3,TPR_12|PF13424.2|56,TPR_12|PF13424.2|0.033,TPR_12|PF13424.2|77,TPR_12|PF13424.2|2.2e+03,TPR_9|PF13371.2|0.38,TPR_9|PF13371.2|1.6e-05,TPR_9|PF13371.2|2.5,TPR_9|PF13371.2|6.3e+03,TPR_17|PF13431.2|2e+03,TPR_17|PF13431.2|0.13,TPR_17|PF13431.2|5.8e+03,TPR_17|PF13431.2|1.9,TPR_17|PF13431.2|81,TPR_17|PF13431.2|5.8e+03,TPR_17|PF13431.2|12,TPR_17|PF13431.2|1.2e+04,TPR_20|PF14561.2|46,TPR_20|PF14561.2|0.12,TPR_20|PF14561.2|0.18,TPR_15|PF13429.2|9.1e+02,TPR_15|PF13429.2|0.055,TPR_15|PF13429.2|0.044,TPR_15|PF13429.2|1.5e+03,TPR_15|PF13429.2|6.9e+02,TPR_15|PF13429.2|3.9e+02,ANAPC3|PF12895.3|0.0056,ANAPC3|PF12895.3|5.4,ANAPC3|PF12895.3|1.3,ANAPC3|PF12895.3|1.7e+03 S_Transcript_42350:515-2803(+)
MEKVDGGTSNNLVVEEEEKRDEEEERYAEEEDENEEEEGEENQEEEEEEEGDEMEYDVRFEGELNPLDIMNNDTSGVQLFQELQRLEYEALLDKNKKRTAPDTPNQGEGSVKRPRQEETYGKTFDEMMEEMCGTRKRSRKSKKRGRRKGSRKKLSPEITKKLGDANLHYAQGHYEEAISVAYEVVRLAPNLPDPYHTLGLVHSAMGNKKKAMDFYLIAASLAPKDSSLWKLLVTWFIEEGKIDEAWHCLKKAIRADPGDISLRYYHASIYMETGDHLKAAESYYQIAQICPDNVDALRTTAMICFDRLRRENGNLQMGLIIAAANTLMDLHNYESALKYYLMLEVCASNNELINVKIARCYSALKETTLAIQFFYRALQACEDDIDTRLTLASLLLEENREEEAILLLSPPPNSVNGTQTDRPQPWWCNVKVKLKLSCIYNAKGMLAPFVEIIYPIIHESLTIDLHQKVKQRRETPSSELRERVKILGDEQTDSLFGNFRRPVPRNDLVKANRAKEKLRKKQTCKEEKKSAALAAGLDWESDESDNEEPQQPLKEPPLPDLFKDEEHYDLISDLCTALTSLRRYGEALEIIKLTLKITDKTLPADKKEKFWSFGAQISLNITDPFDGFDYVRYMVQQCPQSIPAWNCYYKLVLRLENRLSKHNKFLRKIRDVLHKDLVPPMIIYGNQYTMISHHQAAAREYLEAYKQMPESPLVNLCVGTALVNLALGHRLQNKHQCVAQGLAFLYNNLRLCENSQESLYNIG

Click here to download the sequence:
Link to NCBI Protein BLAST