Transcript Information: S_Transcript_423520.p1


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4428735609435
Replicate 22.9239841582249
Replicate 31.8887139362723
Condition 2: 8 Hour
Replicate 12.4408579278646
Replicate 24.0431051758542
Replicate 32.054539528191
Condition 3: 24 Hour
Replicate 11.9739352551742
Replicate 21.9114057955956
Replicate 32.4310404245895


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_423520.p1 GENE.S_Transcript_423520~~S_Transcript_423520.p1 ORF type:complete len:166 (+),score=14.43,zf-RVT|PF13966.2|1.4e-09 S_Transcript_423520:4332-4829(+)
ATGCTTACAATAGATTTAGAGGTGAAATACCAAAAAAGAGGTGGGCCACAACAGTCCAGGATCAGGAAAACATGCATAAGCATTCTATTATTGCTGTTTTGGCCTTATCAAATGGGTTACCTACAGGACAACCTAGTGAAGAGAGGGTTGTATCTAGTAAACAGGTGTGTATTGTGCTGCTGCAATCAGGAGGATGTTGAGCATCTATATTTTGCCTGCCCCTATGCCAAGGAGGTGTGGAGAAACATTTTGAATTGGTTAAAAATCTATAGAAGAGGGTTGAGTCTCAAGAGGGAGATGAAGTGGTATGCCAAGTATGTGAAGGGCAAGAGTTGGGATAAAAAGCTCAAAAGATGTGCATTGATAACTACCATATATGAGCTATGGAAGGAAAGGAATTGCAGACTATTTGAAGACAGAAACAAGCAGGTTGAGCTACTGGTCGGACAAATCAAATTTGATGTCTTGACTAGAATGCTGTATAGATGGTTTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_423520.p1 GENE.S_Transcript_423520~~S_Transcript_423520.p1 ORF type:complete len:166 (+),score=14.43,zf-RVT|PF13966.2|1.4e-09 S_Transcript_423520:4332-4829(+)
MLTIDLEVKYQKRGGPQQSRIRKTCISILLLLFWPYQMGYLQDNLVKRGLYLVNRCVLCCCNQEDVEHLYFACPYAKEVWRNILNWLKIYRRGLSLKREMKWYAKYVKGKSWDKKLKRCALITTIYELWKERNCRLFEDRNKQVELLVGQIKFDVLTRMLYRWFR*

Click here to download the sequence:
Link to NCBI Protein BLAST