Transcript Information: S_Transcript_423523.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9354909989222
Replicate 21.0028540707961
Replicate 30.67064494849457
Condition 2: 8 Hour
Replicate 11.5509374776097
Replicate 21.6270435374347
Replicate 30.38756086554511
Condition 3: 24 Hour
Replicate 10.72816278301981
Replicate 20.89281681967429
Replicate 31.2993174390514


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_423523.p2 GENE.S_Transcript_423523~~S_Transcript_423523.p2 ORF type:complete len:330 (+),score=46.94,RVT_1|PF00078.23|1.9e-09 S_Transcript_423523:3248-4237(+)
ATGGAGGGGTTGGCAAGGAAACTGAGGCAACTCAAGAGAAATCCAACATACTCTTTACATCCCAAGTGTGTCAAGGTGGATCTCACACACCTGACATTTGCTGATGACCTGCTGATTTTCTGTAGGGGAGATGTGCCTGCTGTTAAGGCAGCAATTGAGTGTGTACATGACTTCTCAAGACAATCTGAGCTCTTTATAAATCCCCAGAAGACTAACATATATTTTGGAGGTGTAGATCCACATATCAGAAAGCTGATTCTTGAAGACACTAGATATAGAGAAGGTAGACTTCCAGTCAGATACCTGGGACTCCCTCTCAGTGCTGCTGGAGTAAATGCAAATATGTGCAATAGCCTGCTTGAGAAGATTAGAAGTAAACTGAACCATTGGGATACTAAAACCATTTCTTATGTAGGAAGAATTGAACTTGTCAACTCAGTTCTTTTTGGGGTTGAAAATTTTTGGTGCAGTGCATTCATGTTACCAAAGGTTACCATAGATAAGATTGAACAACTCTACAGACAATTTGTATGGGGAGCACATGATGGAAGTAGAAAAGTCATCTTTTTTGCCTGGAGAAGGGTATGTCAGAGCAAACAACATGGGGGCTTTAACATCAAAGAGAGTCTTAGATGGAACACAACAGTTATACTGAAATGGTTTGTTAAGCTGTATCAGGGACAAAATTCCCTATGGGTGGAGTGGATCAAAAAATACTACCTCAAAGATACTACTATCTGGGGGGTTAGGCCAAGACAGAGTGACTCATGGGTTTGGAAGAACCTTCTCAAGATTAGAGATGAATTTATCAGCGGGAGAGTACAGGAAGCACAGAAGCTAATACATAGCTGGGAAGCCAGGAAGAGACTCACTTCCATGGCTTATCAGTTCTTTAAGGGTGACAACCAGAGAGTGGCATGGGTAAAAACTGTTTGGGACCCTGTAAACACCCCCAAACATTCAGTGATTGTTGCCTTTAACTATTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_423523.p2 GENE.S_Transcript_423523~~S_Transcript_423523.p2 ORF type:complete len:330 (+),score=46.94,RVT_1|PF00078.23|1.9e-09 S_Transcript_423523:3248-4237(+)
MEGLARKLRQLKRNPTYSLHPKCVKVDLTHLTFADDLLIFCRGDVPAVKAAIECVHDFSRQSELFINPQKTNIYFGGVDPHIRKLILEDTRYREGRLPVRYLGLPLSAAGVNANMCNSLLEKIRSKLNHWDTKTISYVGRIELVNSVLFGVENFWCSAFMLPKVTIDKIEQLYRQFVWGAHDGSRKVIFFAWRRVCQSKQHGGFNIKESLRWNTTVILKWFVKLYQGQNSLWVEWIKKYYLKDTTIWGVRPRQSDSWVWKNLLKIRDEFISGRVQEAQKLIHSWEARKRLTSMAYQFFKGDNQRVAWVKTVWDPVNTPKHSVIVAFNYS*

Click here to download the sequence:
Link to NCBI Protein BLAST