Transcript Information: S_Transcript_42356.p1


Annotated TAIR IDAT1G50575.1
Annotated Gene NamePutative lysine decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18728862-18730296 | Reverse length=306
E-Value3.1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.697770307267
Replicate 232.854371406299
Replicate 331.021884879752
Condition 2: 8 Hour
Replicate 136.971736473725
Replicate 242.980698337736
Replicate 337.76612130013
Condition 3: 24 Hour
Replicate 122.497855551454
Replicate 222.479052242845
Replicate 320.904140064023


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42356.p1 GENE.S_Transcript_42356~~S_Transcript_42356.p1 ORF type:5prime_partial len:368 (+),score=48.47,Lysine_decarbox|PF03641.10|4.8e-25 S_Transcript_42356:2-1105(+)
TTTGCCCTAAATCCCAATTCCAATCCCTTATTAGCCACCTTTCCCCCCCATGTCCTTTACTCAATCCATTCTTCCGCCAGTCACCCTCATCACAAAGTTAAGAGATGCCATTCTCATCCAACACTTTCTTTCCCTTTCAAGAGCCAACTTTACCATTTTCATCTCCAATCTAATTCACCCATCTTGGCTGTCTTCTCAGCACTAATGGGATTCACCAATTTGGCTCTATCATCAGGTTCTCATGCCTCAATCACTCCAATATTCGACAAGTTTGATATAAAGCTTCAATCTTTCTTTGATTTCAAGCTAAGTAGAAGGTCAAGAAGGGTTCGATTTACTAAATTTGAAATGCCCATCTGTTGCAAAAGAATGGAATCAATTGACTTTGGAGAAAGAACAAGTGCAAATGAGGTCAGAAAGGAGATTGAACGGTGCTATGAACTAATTCACAGGCTAGGTAGGGGAGTTATCTACCTTGGCTCTGCAAGACCAGCAACTAATCATTCACATTACAAACAAGTACTTGAGCTGAGCAGAGAGGTTGCGAATCTATTACAGTGCACTACATGGACAGGAGCTGGTCCAGGCCTTATGGATGCCGCTATTAAGGGCGCATTGCAAGCTGGGAAGCCAGTTGGTGGATTTAAAATCGCGAAAGAAGCTGGTCAATGGAGTTCCACAGGCTTTCACCCCTACCTCCCCCAAGATACATATCTTACTTGTAGATTTTTCTCGGCAAGGAAACATGGTCTTGTGGACGCTGCAGTGAGAAACAGAAGCTCAGATCGAACGGGTGTGATTGCTCTTCCCGGTGGGATTGGTACTCTCGATGAGATGTTTGAGATTCTAGCACTAATTCAGCTGGAGCGGATAGGGTCGCAGCTTCCAGTTCTGTTCCTGCTTATGAATTATAATGGCTACTACTCCAAGCTGCTGGATTTTCTCAGTGATTGTGAGAATTGGGGCACTCTTGCAAAGGGAGAGGTGGAATCTCTTTGGAAGGTGTTTGATAACAACAAAGAAGCACTGGCCTATTTAGCCCAGTTTTATGATCTTCCTGTCAGCATTGAAGGGTTGAAAGAACATGAGACAAGAACTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42356.p1 GENE.S_Transcript_42356~~S_Transcript_42356.p1 ORF type:5prime_partial len:368 (+),score=48.47,Lysine_decarbox|PF03641.10|4.8e-25 S_Transcript_42356:2-1105(+)
FALNPNSNPLLATFPPHVLYSIHSSASHPHHKVKRCHSHPTLSFPFKSQLYHFHLQSNSPILAVFSALMGFTNLALSSGSHASITPIFDKFDIKLQSFFDFKLSRRSRRVRFTKFEMPICCKRMESIDFGERTSANEVRKEIERCYELIHRLGRGVIYLGSARPATNHSHYKQVLELSREVANLLQCTTWTGAGPGLMDAAIKGALQAGKPVGGFKIAKEAGQWSSTGFHPYLPQDTYLTCRFFSARKHGLVDAAVRNRSSDRTGVIALPGGIGTLDEMFEILALIQLERIGSQLPVLFLLMNYNGYYSKLLDFLSDCENWGTLAKGEVESLWKVFDNNKEALAYLAQFYDLPVSIEGLKEHETRTA*

Click here to download the sequence:
Link to NCBI Protein BLAST