Transcript Information: S_Transcript_424043.p1


Annotated TAIR IDAT1G61520.1
Annotated Gene Namephotosystem I light harvesting complex gene 3
Annotated Gene Symbol(s)LHCA3
Annotation TypeHomolog
Chromosome Positionchr1:22700152-22701149 | Forward length=273
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18874468961121
Replicate 20.15647368480507
Replicate 30.39239864007661
Condition 2: 8 Hour
Replicate 10.15124390295839
Replicate 20
Replicate 30.1511762241488
Condition 3: 24 Hour
Replicate 10
Replicate 20.32147250462904
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_424043.p1 GENE.S_Transcript_424043~~S_Transcript_424043.p1 ORF type:5prime_partial len:141 (+),score=-8.48,Chloroa_b-bind|PF00504.17|3.5e-14,Chloroa_b-bind|PF00504.17|7.6e+03 S_Transcript_424043:1-423(+)
GCCGAGAAGTACGCGATCGACAACAAGACGCTGGCGATCATCGAGGTGGCCGTGTTCGCGGTGCTGGAGTACAAGCGGTACCAGAACTTCAAGACCAAGGGCGAGACCGGCTTCCTGGGCATGGCGCCCTTCGACCCGATGGGCATGCGCAGCGACAAGATGGCGGAGCGCGAGATCAAGAACGGCCGGCTCGCGATGATCGCCTTCCTCGGCATCTGCTCGCAGGCCGCCGTCCGCGGCGATGGCCCGATCCAGAACCTGAAGGACCACATCGCGGACCCCGGCCACGTCAACATCTACACGTCGTCCGTCGGCGTCGAGGCGACGTTCGCCGTCATTGCGCTCATGGTGAGCCCCATCATTGTGGAGGCATACAAGCGTGTTGGCACCGGCAAGGAAGAGTTTGACCCCATCCCATGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_424043.p1 GENE.S_Transcript_424043~~S_Transcript_424043.p1 ORF type:5prime_partial len:141 (+),score=-8.48,Chloroa_b-bind|PF00504.17|3.5e-14,Chloroa_b-bind|PF00504.17|7.6e+03 S_Transcript_424043:1-423(+)
AEKYAIDNKTLAIIEVAVFAVLEYKRYQNFKTKGETGFLGMAPFDPMGMRSDKMAEREIKNGRLAMIAFLGICSQAAVRGDGPIQNLKDHIADPGHVNIYTSSVGVEATFAVIALMVSPIIVEAYKRVGTGKEEFDPIPW*

Click here to download the sequence:
Link to NCBI Protein BLAST