Transcript Information: S_Transcript_424229.p1


Annotated TAIR IDAT3G46510.1
Annotated Gene Nameplant U-box 13
Annotated Gene Symbol(s)PUB13, ATPUB13
Annotation TypeOrtholog
Chromosome Positionchr3:17124106-17126539 | Reverse length=660
E-Value7.1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8607978836177
Replicate 20.89202653197499
Replicate 30.49710878931538
Condition 2: 8 Hour
Replicate 12.0118292752012
Replicate 22.170853237278
Replicate 32.5280250528819
Condition 3: 24 Hour
Replicate 11.7664326272718
Replicate 21.0995919363187
Replicate 31.4276628908556


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_424229.p1 GENE.S_Transcript_424229~~S_Transcript_424229.p1 ORF type:5prime_partial len:371 (+),score=32.31,U-box|PF04564.11|3.6e-08 S_Transcript_424229:3-1115(+)
CAAGTCTCCCATACAGCTGCCTCCTCTTCAAAAACCCATCACGACACGGGTCCCTTCTCAAACACCACCTATATATACCTCCACCCCCCCTTCACGTCCTTTTCAAACCCTTCCAAAACAAAAAAATCCAAAACAAAATCCAAGTACAAAAACTGCAAAAATAAAAACCAAACCATCAAAAAAAACTCGATGATATACAACTCCGACGTGTTAAATCGCCGGGCTTCCGAATTTCCGGCGATAAAACCCTGTGAATACGTTTCCCCAACAACCTTAATCAACTCCCTAGTTTCTTTTTCATCAAAAATCACAAACCCTAATTCCCAAGATTCAGCCTTTTTCACCTCCAACAAAGGGAATGCCAAGAAAATCACCCGTTTGATCCAAGTTCTTCAAGTATTTCTTGAAGGGGTCCAAGATGAGGGGATTTCGGACCTACCCAGATCCGCCAAATCTTGTCTTTTGGATCTCCACGTCATCCTTCAAAGAATCCACTCTCTGTTTCAGTTTTGCACGCGCCCTGACGCGGGTGTTTGGGTGCTGGTCAACTGTGGGCCCGTTTGTGATCATTTTCGGGCCTTGATGGGCTCACTTTGTGATGCATTGGGTGGGTTTCCTTTGGATTTGATCGGTGGTGGTGATCATGAGGTGAAAGATTATGTCTTGCATTTGATTGGTCAAGGGAAAAGATTGAAGTTTGAAATTGAAAATGAGGATTTGAAGGTTTTGATTATGATTAAGTCCATATTGGGTCAGTTTGAGAACCGGGTCATACCCGACCTAAATTCGGTCAGGGGGGTCATGGACTATTTGGGTGTCCAGAAGTGGAGCGACTGCAACAAGCAGGTCAAGTTCTTGGAAGATGAGTTGGTTTCGGATCCGGGTATGGGTAGTCGGTTGTTGGGTCTGATGGCGTATTGTAGGTGTGTGCTGTTTCAGTCCATTGATGAAGGAAGTCTGGAAAATAAAAGGGAGGAAAGTTATGATCTTAGTTGCTTTCACCCGGATGACTTCCGGTGCCCGATTTCCCTCGAGATCATGTCGGATCCGGTGACTATCTCATCGGGTCAGACCTATGATAGGGGTGTTGGAAAAATGGCTGGACGTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_424229.p1 GENE.S_Transcript_424229~~S_Transcript_424229.p1 ORF type:5prime_partial len:371 (+),score=32.31,U-box|PF04564.11|3.6e-08 S_Transcript_424229:3-1115(+)
QVSHTAASSSKTHHDTGPFSNTTYIYLHPPFTSFSNPSKTKKSKTKSKYKNCKNKNQTIKKNSMIYNSDVLNRRASEFPAIKPCEYVSPTTLINSLVSFSSKITNPNSQDSAFFTSNKGNAKKITRLIQVLQVFLEGVQDEGISDLPRSAKSCLLDLHVILQRIHSLFQFCTRPDAGVWVLVNCGPVCDHFRALMGSLCDALGGFPLDLIGGGDHEVKDYVLHLIGQGKRLKFEIENEDLKVLIMIKSILGQFENRVIPDLNSVRGVMDYLGVQKWSDCNKQVKFLEDELVSDPGMGSRLLGLMAYCRCVLFQSIDEGSLENKREESYDLSCFHPDDFRCPISLEIMSDPVTISSGQTYDRGVGKMAGRW*

Click here to download the sequence:
Link to NCBI Protein BLAST