Transcript Information: S_Transcript_424230.p1


Annotated TAIR IDAT1G10560.1
Annotated Gene Nameplant U-box 18
Annotated Gene Symbol(s)PUB18, ATPUB18
Annotation TypeHomolog
Chromosome Positionchr1:3484613-3486706 | Forward length=697
E-Value6E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84822314693802
Replicate 20.48344757994554
Replicate 30.40412369904304
Condition 2: 8 Hour
Replicate 10.50977028646533
Replicate 20.62391609752226
Replicate 31.0615461954672
Condition 3: 24 Hour
Replicate 10.56570415413889
Replicate 21.264116980354
Replicate 30.80388986151764


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_424230.p1 GENE.S_Transcript_424230~~S_Transcript_424230.p1 ORF type:5prime_partial len:502 (+),score=78.76,U-box|PF04564.11|6.8e-18,Arm|PF00514.19|0.0018,Arm|PF00514.19|0.2,Arm|PF00514.19|17,Arm|PF00514.19|9.4 S_Transcript_424230:3-1508(+)
AAGGTTTTGATTATGATTAAGACCATATTGGGTCAGTTTGAGAACTGGGTCATACCCGAGCCGAATTCGGTCAGGCGGGTCATGGACTATTTGGGTGTCCAGAAGTGGAGCGACTGCAACAAGCAGGTCAAGTTCTTGGAAGATGAGTTGGTTTCGGATCCGGGTATGGGTAGTCGGTTGTTGGGTCTGATGGCGTATTGTAGGTGTGTGCTGTTTCAGTCCATTGATGAAGGAAGTCTGGAAAATAAAAGGGAGGAAAGTTATGATCTTAGTTGCTTTCACCCGGATGACTTCCGGTGCCCGATTTCCCTCGAGATCATGTCGGATCCGGTGACTATCTCATCGGGTCAGACCTATGATAGGGGGTCCATTATCAAGTGGTTCAAGGCGGGTAACCCGGTTTGTCCCAAAACGGGTCAGGGTCTTGAGAGCTTGGATATGGTACCTAACTTGGCGCTAAAGCAGCTTATTAAGCAATACTGTTTGGAGTATGGGATTGCCTTACCCTTTTATAAAGATAGGAGCATTGTAAGGAATGGTTGTGTAGGAAGTTTGGCAGCAAAGGAAGCTATAAGAATGGTGGCTGATTTCTTGTCAATCAAGTTGGCTGTGGGAACAATGGCTGAGAAAAGCAAGGCAGCTTTTGAGGTTAAGATCCTTACTAAAAGGAGAATCTTCAACAGGGCTTGTTTTGTGGAATCAGGGGCAATAGCTTACTTGTTGAATCTGATTTTGTCTAAAGATTCAACTGCCCAAGTGAATTCAATAGCAGCCCTGTTGAACTTGTCTAAGCACTCCCAAGGCAAGGCCGTCATTGTCAACTGTGGCGGCCTTGTGTTGGTGATCGGATTGCTGAAGCATGGGATCAAGATCGAGGCTAGGCAAAATGCTGCAGCCACGTTGTTTTATCTGTCTTCGGTTGAGGAGTACCGAAGATTGATTGGGAACAACCCCGAAGCAATTCCTTCCCTTGTGGAATTGATCCGTGTTGGGGGCAACAGGGGCAGGAAGAATGCGCTTGTTGCCATCTTCGGTCTCCTACTGCTCCCTAGCAACCATTCTAAGGTGCTCGAGGCTAGATTGGTTCCGACTCTAGTCTCATTGCTAGGAAGTATGGAGTCCGAAGATCTGATTGTTGATTCTCTAGCTGTTCTCGCAGCCTTGGCTGAGAAGCCTGATGGAGCCAGGGCAATCTTGCGTGCTAGGGCTCTGAATACTATCGCGGGGATCCTGTGCTCGTCTTCCTGTGATTCGTCAAGTTTGGGTAGAGAGCATTGTGTGTCATTGTTGCTTGCTTTGTGCATACATGGTGGAGAAGTGGTCGAGGTTTTAGTGCAGAACACTTCTCTTACAGGAGCATTGTATTCTCTTCTTGCGGAAGGAACTTCAAGGGCCAGCAAGAAGGCCAGCTCGCTCATCAATATTCTGCATGAGTTCTCTGAAAGAAGCTCATCTAGATCCATGCCTCAAGCTTTGCCACACGAAAATTTTATTCATGTGTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_424230.p1 GENE.S_Transcript_424230~~S_Transcript_424230.p1 ORF type:5prime_partial len:502 (+),score=78.76,U-box|PF04564.11|6.8e-18,Arm|PF00514.19|0.0018,Arm|PF00514.19|0.2,Arm|PF00514.19|17,Arm|PF00514.19|9.4 S_Transcript_424230:3-1508(+)
KVLIMIKTILGQFENWVIPEPNSVRRVMDYLGVQKWSDCNKQVKFLEDELVSDPGMGSRLLGLMAYCRCVLFQSIDEGSLENKREESYDLSCFHPDDFRCPISLEIMSDPVTISSGQTYDRGSIIKWFKAGNPVCPKTGQGLESLDMVPNLALKQLIKQYCLEYGIALPFYKDRSIVRNGCVGSLAAKEAIRMVADFLSIKLAVGTMAEKSKAAFEVKILTKRRIFNRACFVESGAIAYLLNLILSKDSTAQVNSIAALLNLSKHSQGKAVIVNCGGLVLVIGLLKHGIKIEARQNAAATLFYLSSVEEYRRLIGNNPEAIPSLVELIRVGGNRGRKNALVAIFGLLLLPSNHSKVLEARLVPTLVSLLGSMESEDLIVDSLAVLAALAEKPDGARAILRARALNTIAGILCSSSCDSSSLGREHCVSLLLALCIHGGEVVEVLVQNTSLTGALYSLLAEGTSRASKKASSLINILHEFSERSSSRSMPQALPHENFIHVW*

Click here to download the sequence:
Link to NCBI Protein BLAST