Transcript Information: S_Transcript_4243.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value5.2E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 189.471930532999
Replicate 2107.09927752996
Replicate 3100.33187866339
Condition 2: 8 Hour
Replicate 148.799819560065
Replicate 247.28283347476
Replicate 352.864609781066
Condition 3: 24 Hour
Replicate 1134.21871666153
Replicate 2130.3864374584
Replicate 3130.44284315039


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4243.p1 GENE.S_Transcript_4243~~S_Transcript_4243.p1 ORF type:complete len:652 (+),score=129.82,UPF0118|PF01594.12|8.5e+03,UPF0118|PF01594.12|81,UPF0118|PF01594.12|2.9e-07 S_Transcript_4243:1058-3013(+)
ATGGAGCTAGTCCCATACTCAGACCCAAAAGAAACCTCAAACTCTACAACACCACCTTGGCAAGATATGTTCAGATCAGCTTCAGTTCGCAAACCCACTTCCCCACCACGTGACTCTCACGTGCCACCATCATCATCAACTGCCACCTCTACCCTCACCCCAACTACCACCACCGCCACCTTCTCAGGTGACCCTCACGTGCGTTTAGCCCTTTACATTGCAATGACACATGCTGGTCTCCTTTTCTCTCTTCTTACTCTTTACGGTGTTTTTCTACTTTTACAAGGTTATCTACGCCCACTTCAATGGGCTGTCATTTGTTCCATCCCTTTGAGAGGTATTCAACAAACCCTTGTTGGGTTTTGGTCTGAGCCCCTTAAACTTGGCCTCACTGAAACCATTTTAGCTGTCCCAATTGCCATTTTTAGGGTCTTTATTGGTACCATTGTTGAGTTGAAATATGTTGTGTTTAAGTTCCTAGGACTTCAGAAAGGGAAAAGATCCAACTTATTGAGGAAAAAGAGAAGTGGGTTTTCAAAATGGTTGCGTTGGCTTCTTTCTTTTAGTATATTTGTGCTTGTTTATGAGCGTTTGGGATTGTTTGGGGCATTTGGGATTTTGGGGTTTGGGTTTGTGTTTAGTGCTAGTAGTGTGGAATCAACTATGGATGCTGTGTCTACTTTTAGGAACCAAAGTTTTAGGAGAATGAAAGTTACTTCTTTCTTGACTAGAGGTGTTTTGAAGAGGTTAGAGACTCTTGTTGCTATTGGATTGATTGTTGTTATGATTGTTGGGTTCTTGGCTTGCTCTATTTTCTTCTCTTATAAGATTGGTGTCGAGGGACGGGATGTGGTTTTTAAGTTGAAGTCTCATGTGGAGGAGAGTAATTATGCTGAGAAGATTGGGTTTAAGAAGTGGATGGATGAGAATGATGTGCCTGGGATGGTGGATAGGTACACTACTAAGTTTTATGAGACGGTTTCGGACCAGATTGATGGATTAGCAATGCAGTATAATATGACCGAATTTGTCACTGGGATTAAACAGTTTGTGATTAAGCCTGTCAACTCTTCTGAGCCTTCAACTGAGTTGATGGCCCCTTCTTTTTATACTGAGAAGATGATGAGTTTGAGAGAAAAGTTTAAGGATAGAGCTTGGATGGATATCTTCACTGATCTTGATGACATTGTTAGAGACCTTATTGCTAGTAGGGTTGATTTGGTTGAGAAGGTAAAAGGGTTTGCCATTCAAGGACTTGATGTGGCACAACGCTTGTTTTCGAGTAGCATTCCTGTTCTTGGTGGTGGGGCTAAGTTTATGTTCACCATTCTTGGGTCCATTGTTTCTGGTGCAGCCGGTTTTATCAACTTTATATCGCAGTCAATGGTGTTCTTTTGGGTTTTGTATTACCTTATAACCTCAGAATCTGGTGGAGCCACCGAGCAGGTTATGCATTTGCTCCCTGCATCAAATGCAACTAGAACTCGTTGTCTTGAGGTTATTGATAAGGCAGTGTCCGGAGTCATGCTGTCTACAGTCGAGATTGCATTGGTTCAGGGTTGTTTGACTTGGCTTCTGTTTAGGCTGTTCTCTATTCACTTCCTGTACATGTCAACCTTACTAGCATTCATCTGCCCTTTGTTGCCCCTTTTCCCTACATTTGTGGCAACCATCCCGGCAGCCTTACAGCTTGTTTTGGAGGGCAAATACATATTGGCTATTTGCTTGTTTGTTATTCATCTTGTGCTCTTGGAGTATGGTGCATCTGAGATCGTCGAGGATATACCTGGTTACAATGGATACCTTACTGGGCTTAGCATTATTGGTGGGATGACATTGTTCCCATCCGCATTGGAGGGAGCTATAATGGGACCTCTGATAACCACTGTTGTGATCGCCCTTAAGGACTTGTATGCTGAATTTGTGTTGAATGAACCGAAGGAAAAGAGCGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4243.p1 GENE.S_Transcript_4243~~S_Transcript_4243.p1 ORF type:complete len:652 (+),score=129.82,UPF0118|PF01594.12|8.5e+03,UPF0118|PF01594.12|81,UPF0118|PF01594.12|2.9e-07 S_Transcript_4243:1058-3013(+)
MELVPYSDPKETSNSTTPPWQDMFRSASVRKPTSPPRDSHVPPSSSTATSTLTPTTTTATFSGDPHVRLALYIAMTHAGLLFSLLTLYGVFLLLQGYLRPLQWAVICSIPLRGIQQTLVGFWSEPLKLGLTETILAVPIAIFRVFIGTIVELKYVVFKFLGLQKGKRSNLLRKKRSGFSKWLRWLLSFSIFVLVYERLGLFGAFGILGFGFVFSASSVESTMDAVSTFRNQSFRRMKVTSFLTRGVLKRLETLVAIGLIVVMIVGFLACSIFFSYKIGVEGRDVVFKLKSHVEESNYAEKIGFKKWMDENDVPGMVDRYTTKFYETVSDQIDGLAMQYNMTEFVTGIKQFVIKPVNSSEPSTELMAPSFYTEKMMSLREKFKDRAWMDIFTDLDDIVRDLIASRVDLVEKVKGFAIQGLDVAQRLFSSSIPVLGGGAKFMFTILGSIVSGAAGFINFISQSMVFFWVLYYLITSESGGATEQVMHLLPASNATRTRCLEVIDKAVSGVMLSTVEIALVQGCLTWLLFRLFSIHFLYMSTLLAFICPLLPLFPTFVATIPAALQLVLEGKYILAICLFVIHLVLLEYGASEIVEDIPGYNGYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLYAEFVLNEPKEKSE*

Click here to download the sequence:
Link to NCBI Protein BLAST