Transcript Information: S_Transcript_424574.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19713334248282
Replicate 20.16342807079641
Replicate 30
Condition 2: 8 Hour
Replicate 10.15796585420098
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_424574.p1 GENE.S_Transcript_424574~~S_Transcript_424574.p1 ORF type:5prime_partial len:135 (+),score=23.88,RVT_1|PF00078.23|1.3e-20 S_Transcript_424574:2-406(+)
GGGGATTTGCAAAAAGCATATGATAGTGTTGAATGGATTTTTCTTAAGCAAATGTTGGCTAAACTGGGATTCCCTGCTCTTTTTACTAGCTGGATTATGAGTTATGCTTCTTCTGTATCATATTCTATCTTGGTGAATGGAGAGTTGATTGAAAGGTTTGAGGCTCAGAAGGGGTTGAGACAGGGTGATCCTTTATCTCCATATCTTTTCGTTATAGCTATGGAATACCTGAATAGGTGCTTAAAGGAGATGAGCTGTAATCCGCATTATAATTTCCACCCTAAATGTAGGAAAATTCAGCTTACTCGCTTAGTGTTTGCTGATGATCTAATGCTCTTTGCCAGAGTTGATTTGAGATATGTTCAGCTTGTTCAGAAGGCTTTTAAGAATTCTCATAGTCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_424574.p1 GENE.S_Transcript_424574~~S_Transcript_424574.p1 ORF type:5prime_partial len:135 (+),score=23.88,RVT_1|PF00078.23|1.3e-20 S_Transcript_424574:2-406(+)
GDLQKAYDSVEWIFLKQMLAKLGFPALFTSWIMSYASSVSYSILVNGELIERFEAQKGLRQGDPLSPYLFVIAMEYLNRCLKEMSCNPHYNFHPKCRKIQLTRLVFADDLMLFARVDLRYVQLVQKAFKNSHSH*

Click here to download the sequence:
Link to NCBI Protein BLAST