Transcript Information: S_Transcript_424653.p1


Annotated TAIR IDAT3G13160.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4229994-4231178 | Reverse length=394
E-Value2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1405571957934
Replicate 20.63036541592899
Replicate 30.59280223125859
Condition 2: 8 Hour
Replicate 13.046484331019
Replicate 23.6753751336694
Replicate 33.5780172765504
Condition 3: 24 Hour
Replicate 11.0142267334919
Replicate 20.56659528940868
Replicate 30.54047238010963


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_424653.p1 GENE.S_Transcript_424653~~S_Transcript_424653.p1 ORF type:complete len:280 (+),score=64.13,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|1e-15,PPR_2|PF13041.2|3.2e-10,PPR_2|PF13041.2|3.5e-13,PPR_2|PF13041.2|8.7e-05,PPR_1|PF12854.3|11,PPR_1|PF12854.3|5.6e-11,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|53,PPR|PF01535.16|11,PPR|PF01535.16|0.17,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.047,PPR|PF01535.16|0.042,PPR|PF01535.16|1.3e+04,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|0.008,PPR_3|PF13812.2|4.9e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|1.6e+04 S_Transcript_424653:418-1257(+)
ATGTTTGATCATGCACACCAATTGTTCGACGAAATGCCTCAACTAAAATGTGCCAGAACTGTCAAGTCCCTGAATGCCCTTTTGGGGGCTTGTGTTAGTACCAAGAAATTTGATAAGGTTGAGGGGTTTTTCAAGGAGTTGCCTTTGAAGTTGGGTGTTAAGCCTGATGTTGTGTCTTATAATACTGTGATCAGAGGTTTTTGTGAGATGGGTTGTTTTGATAGTGCTGTTTTGATGCTTGGTGAGATGGAGAAGGAGGGCTTGTGTCCTAATTTGATTACTTTCAATACCCTCTTCAATGGGTTGTATAAGAAAGGAAGGTTTTTAGAGGGTGAGAAAATATGGGGTATGATGGAAAAATATAATGTAGTTCCTGATAACATAAGTTATAATATGAAGTTACATGGGTTGGTTTCGGATAAGAAAGGACGCGAAGCTGTCGAGTTAGTTGAAGAAATGAAAACAAAGGAGTTGAAGCTTGATGTGTTCACTTTTAATACCTTGTTCAAAGGGTTATGTGATGAGGGGGAAAGTAGTGTAGAGGAAGCTAAAAAATGGTACAAGGAAATGATGAAAACCAAGTGTACGCCTAACCGGCTGACTTATGCTATGTTGCTGACACTGGCTTGTGACAAGGAGGATTTTCTGTTTGGTGATCAGTTGTGTAGGGGGATGTTTTATTGTAAGTGTGAGTTGAATGAAGGCGTTTTGGTGCAGAAGGTGGTGGATGGGTTGGTGAAGCAGTCAGAAACTGCAAAAGCACAAGTTCTGGTTCGACTTGCCAAGAAGAGTAAACACTCTTGTTATCATGGGATTCAAATGCCTCAGCTAGATAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_424653.p1 GENE.S_Transcript_424653~~S_Transcript_424653.p1 ORF type:complete len:280 (+),score=64.13,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|1e-15,PPR_2|PF13041.2|3.2e-10,PPR_2|PF13041.2|3.5e-13,PPR_2|PF13041.2|8.7e-05,PPR_1|PF12854.3|11,PPR_1|PF12854.3|5.6e-11,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|53,PPR|PF01535.16|11,PPR|PF01535.16|0.17,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.047,PPR|PF01535.16|0.042,PPR|PF01535.16|1.3e+04,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|0.008,PPR_3|PF13812.2|4.9e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|1.6e+04 S_Transcript_424653:418-1257(+)
MFDHAHQLFDEMPQLKCARTVKSLNALLGACVSTKKFDKVEGFFKELPLKLGVKPDVVSYNTVIRGFCEMGCFDSAVLMLGEMEKEGLCPNLITFNTLFNGLYKKGRFLEGEKIWGMMEKYNVVPDNISYNMKLHGLVSDKKGREAVELVEEMKTKELKLDVFTFNTLFKGLCDEGESSVEEAKKWYKEMMKTKCTPNRLTYAMLLTLACDKEDFLFGDQLCRGMFYCKCELNEGVLVQKVVDGLVKQSETAKAQVLVRLAKKSKHSCYHGIQMPQLDN*

Click here to download the sequence:
Link to NCBI Protein BLAST