Transcript Information: S_Transcript_42470.p1


Annotated TAIR IDAT3G17930.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6142307-6143246 | Reverse length=190
E-Value2.5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1268.10622531481
Replicate 2306.47617573459
Replicate 3317.63504373686
Condition 2: 8 Hour
Replicate 1463.03545510369
Replicate 2439.57360025285
Replicate 3407.21710845358
Condition 3: 24 Hour
Replicate 1340.10969593029
Replicate 2360.82583182937
Replicate 3321.89322018015


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42470.p1 GENE.S_Transcript_42470~~S_Transcript_42470.p1 ORF type:3prime_partial len:202 (+),score=51.15,DUF3007|PF11460.4|1.9e-33 S_Transcript_42470:14-616(+)
ATGGTGGGTGCAATTGCTAATCTTCATCAGGGAAATTTTGATTGCAAAAGTATCAGCTTCAGGGGAGGGGGAGCTCTTTCTCCATTTGCTTCTGCTCATTCTTTGCAGAACTCTTTCTTAAGAGTTGGAAGTACTTCTCAAACATGGGGCAAGAAGGAAACCGTTCCTGTTAAGATAGGGTCCAATCAGAAGCTGTTGAGAGTTGGTTTTGTGATTCCAAGAAGCAGTGGTTCCTCAAGCTCCAATGATACTGTAGACCAGTCCTCTAGCCAAGAGAAGGCACCTTTTGGATACACTAGGAAGGATGTGCTGTTGATTGGGTTAGGAGTGACTCTTTTTGGAGTGGCCTTGAAAAATGGATTGGAGTTTGTTGGAGTTGATCCCTTACAAGCAGGGAATGTTGTTCAGTTGGTAATAGTCTTAGGCATGACTGTTGGATGGATCTCAACATATATGTTTAGGGTTGCAAGCAAAGACATGACATACGCCAAGCAGTTACGGGACTATGAGAGCAAAGTTATGGAGAAACGGTTGGAGGGTCTTACGGAAGCAGAACTGCAAGTATTACTTGAACAAGTTGAGGAAGAAAAAAGACGTCTCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42470.p1 GENE.S_Transcript_42470~~S_Transcript_42470.p1 ORF type:3prime_partial len:202 (+),score=51.15,DUF3007|PF11460.4|1.9e-33 S_Transcript_42470:14-616(+)
MVGAIANLHQGNFDCKSISFRGGGALSPFASAHSLQNSFLRVGSTSQTWGKKETVPVKIGSNQKLLRVGFVIPRSSGSSSSNDTVDQSSSQEKAPFGYTRKDVLLIGLGVTLFGVALKNGLEFVGVDPLQAGNVVQLVIVLGMTVGWISTYMFRVASKDMTYAKQLRDYESKVMEKRLEGLTEAELQVLLEQVEEEKRRLN

Click here to download the sequence:
Link to NCBI Protein BLAST