Transcript Information: S_Transcript_42517.p1


Annotated TAIR IDAT1G74750.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28086800-28089367 | Forward length=855
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.078688246255
Replicate 216.692242099436
Replicate 314.297164924458
Condition 2: 8 Hour
Replicate 19.9845851594471
Replicate 29.8858059230371
Replicate 310.728041722244
Condition 3: 24 Hour
Replicate 117.198055204218
Replicate 218.811957635192
Replicate 316.510483015191


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42517.p1 GENE.S_Transcript_42517~~S_Transcript_42517.p1 ORF type:complete len:912 (+),score=173.08,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|1.6e-16,PPR_2|PF13041.2|7.3e-14,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|2.1e-12,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|6.4e-09,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.5e-12,PPR_1|PF12854.3|3.9e-06,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|67,PPR_1|PF12854.3|0.0084,PPR_1|PF12854.3|3e+03,PPR|PF01535.16|0.022,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|4.1e-07,PPR|PF01535.16|0.0066,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|0.07,PPR|PF01535.16|0.51,PPR|PF01535.16|8.2e+03,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|0.00032,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|8.8e+02 S_Transcript_42517:1953-4688(+)
ATGATCCGAGCCAAGCAGATCACTACCTTTTCCAACTGTGCTAGATCAATATTATATAGTGGGTCAAGATGTAGTCCAACAGATGGGAACTCATGTTCCTGCACTGATGATGAAAAGTGTGTCTCAAGGGGACAGAGTTCATTGCTACGGCCAAAATCATCGGCTGTATTGTCGTCACCTGCCAAAAGGGTAGAATCCTTTGTCCCAAAGGATGCAACGAAAGTGGCAGCTCCCGACAATTTGGACAATGTTGACCACTCAATGTCATCTCCTCAAGCTATCCCTCTTTCGAGCACTTCGAGAAAGTCAGATTCTGTAAGTTATTCTAGTTGTGATCAAAATAATGTGGTAGATTCATCGTCTCACATAACAGATCAGTTGGTGAAAGCAGGTATTGCTGCGGTAGGTTTTCTGTCAGATGTAGTGAATTACAAAATTCCTTTGACAGATGGAAGTGGAACAGTTGCTTCACAAAATTACGTGGTTGGTCATACTAGACCTCATACATACACCAAACCTTCCACTGTAAAATCTGCAAAGAAAGGTTGTGAGGTTTATGAGAAACCTTCTTCAGGGACGAGCGCTTCAAGCTCTTCTGTGAAATATCAACCAAAAGCTAAAGCTGATAATCATGCTACTGGGAAAGGTTTCAGCCATGATGCAAGTAGCAAGATAAGAGATCCAGTTGGAACTCAGGGCATATCACTAGACAAGAAGAACTATGTAGGAACTCAGGGTATATCTTCAGACAAGAAGAATTATGTAGGAAGTCAGGGTATTTCGTCTGACAAGAAGAATTATGTAGGAAGTCAGGGTACTTCGTCAGACAAGAAGAATTATGTTGGAACTCAGGGTGTTCCTTCAGACAAAAAGAATTACATTCCAGATAAGTCCAAAATATATACGACTCAGTACACGCAGCATAGCAGTTCCAATGTGCAGTCCCCCAAATTCACCCGTGGAGTTCCACAGTACATTAGCAACCGCCAAAGGGATTTGAAACCTCATTTGGGAACTGCTCCATTTGCTAGGCAGTGTGCCAGCACTGGCCAGGTTGTTGAAAGTGTGTTGGACATATTGAGAAGGCTGAAATGGGGTCCGGCAGCTGAAACAGCTCTTGAAACTCTGAATTTCCCAATGGATGCTTACCAGGCTAATCAAGTTCTGAAGCAGATTTCAGATTATGTAGTTGCACTTAGCTTTTTCTACTGGTTAAAACGACAAGTAGGTTTTAAGCATGATGGACACACCTATACTACTATGGTGGGAATCCTTGGTCGTGCTAGACAGTTTGATGCAATAAACCTTTTGCTCGATCAGATGGTGAAGGATGGATGTGAACCTAATGTAGTTACATATAACCGTCTGATCCACAGTTATGGGCGTGCAAACTACCTTAATGAAGCAGTCCAAGTTTTCCACCAAATGCAGGAAGCTGGTTGTCAGCCTGACCGTGTGACTTACTGCACGCTCATTGACATCCATGCCAAAGCAGGATTTCTTGATGTTGCCTTGTACATGTACCAGCGGATGCAAGAGGCAGGCCTTTCTCCTGACACATTCACTTACAGTGTCATGATCAACTGCCTGGGAAAGGCAGGCCATTTGACTTCTGCCCACAAGCTGTTCTGCGAGATGGTAGATCAGGGTTGTGTCCCTAATCTTGTTACATACAACATCATGATTGCCTTGCAGGCAAAAGCCAGGAATTATCCTGTTGCATTACAGATATACCGTGATATGCAGAATGCTGGATACGAGCCTGACAAAGTCACGTACAGTATAGTGATGGAAGTCCTTGGGCATTGTGGGTATCTGGAAGAGGCTGAGGCAATCTTTTCTGAGATGAAAAGCAAAAACTGGGTTCCTGATGAGCCTGTTTATGGTCTTCTGGTCGACTTGTGGGGCAAAGCCGGGAATACTGAAAAAGCTCTGCATTGGTATCAAGCTATGCTGAAAGCTGGTTTGTTTCCCAATGTGCCCACCTGTAATTCCTTGCTCAGTGCTTTCCTTAGAGCTCACTGTCTGGCAGATGCTTATAACTTGCTACAAGGCATGGTTCACATGGGGCTTAACCCTTCCCTCCAGACTTTCACTTTGCTCCTCAGCTGTTGCACTGAAGCCAAGTCGTCATTCGACATGACCTTCTGTGGTCAACTGATGGCCGTCACTGGTCATCCGGCCCATGCATTTCTACTTTCTTTGCCACCAGCGGGTCCTGATGGACAGAATGTAAGAGACCATGTTGGAAGATTCTTGGACCTGATGCATAGCGAGGATAGAGAGAGCAAACGAGGACTTGTGGATGCTGTGGTGGACTTTCTTCACAAATCCGGTTTGAAGGAGGAAGCTGGCTCAGTTTGGGAGGTGGCCGCTCTCAAGAATGTGTACCCGGATGCCGTGAAGGAGAAAAGTTCCTGTTATTGGCTCATCAACCTTCATGTCATGTCTGACGGAACTGCAGTGACCGCTCTCTCAAGGACACTCGCTTGGTTCCGCAGGGAGTTGCTCATGTCGGGGATTAGCCTAAGCCGGATTGACATTGTTACTGGGTGGGGCCGGAGGAGCAGGGTGACAGGGACATCTATGGTGAGGCAGGCTGTGCAGGAGTTGCTCGACTTATTCAACTTTCCGTTCTTCACTGAAAATGGAAATTCTGGGTGCTTTGTGGGCTGTGGAGAGCCCCTCAACAGGTGGTTACAGCAGCCATATGTTGAGCGCATGCATTTGCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42517.p1 GENE.S_Transcript_42517~~S_Transcript_42517.p1 ORF type:complete len:912 (+),score=173.08,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|1.6e-16,PPR_2|PF13041.2|7.3e-14,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|2.1e-12,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|6.4e-09,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.5e-12,PPR_1|PF12854.3|3.9e-06,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|67,PPR_1|PF12854.3|0.0084,PPR_1|PF12854.3|3e+03,PPR|PF01535.16|0.022,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|4.1e-07,PPR|PF01535.16|0.0066,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|0.07,PPR|PF01535.16|0.51,PPR|PF01535.16|8.2e+03,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|0.00032,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|8.8e+02 S_Transcript_42517:1953-4688(+)
MIRAKQITTFSNCARSILYSGSRCSPTDGNSCSCTDDEKCVSRGQSSLLRPKSSAVLSSPAKRVESFVPKDATKVAAPDNLDNVDHSMSSPQAIPLSSTSRKSDSVSYSSCDQNNVVDSSSHITDQLVKAGIAAVGFLSDVVNYKIPLTDGSGTVASQNYVVGHTRPHTYTKPSTVKSAKKGCEVYEKPSSGTSASSSSVKYQPKAKADNHATGKGFSHDASSKIRDPVGTQGISLDKKNYVGTQGISSDKKNYVGSQGISSDKKNYVGSQGTSSDKKNYVGTQGVPSDKKNYIPDKSKIYTTQYTQHSSSNVQSPKFTRGVPQYISNRQRDLKPHLGTAPFARQCASTGQVVESVLDILRRLKWGPAAETALETLNFPMDAYQANQVLKQISDYVVALSFFYWLKRQVGFKHDGHTYTTMVGILGRARQFDAINLLLDQMVKDGCEPNVVTYNRLIHSYGRANYLNEAVQVFHQMQEAGCQPDRVTYCTLIDIHAKAGFLDVALYMYQRMQEAGLSPDTFTYSVMINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPVALQIYRDMQNAGYEPDKVTYSIVMEVLGHCGYLEEAEAIFSEMKSKNWVPDEPVYGLLVDLWGKAGNTEKALHWYQAMLKAGLFPNVPTCNSLLSAFLRAHCLADAYNLLQGMVHMGLNPSLQTFTLLLSCCTEAKSSFDMTFCGQLMAVTGHPAHAFLLSLPPAGPDGQNVRDHVGRFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAALKNVYPDAVKEKSSCYWLINLHVMSDGTAVTALSRTLAWFRRELLMSGISLSRIDIVTGWGRRSRVTGTSMVRQAVQELLDLFNFPFFTENGNSGCFVGCGEPLNRWLQQPYVERMHLL*

Click here to download the sequence:
Link to NCBI Protein BLAST