Transcript Information: S_Transcript_425274.p1


Annotated TAIR IDAT1G30100.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 5
Annotated Gene Symbol(s)NCED5, ATNCED5
Annotation TypeOrtholog
Chromosome Positionchr1:10571383-10573152 | Forward length=589
E-Value1.1E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1358042460078
Replicate 25.7020385173983
Replicate 34.7041438321346
Condition 2: 8 Hour
Replicate 16.3399809050936
Replicate 26.2353970026265
Replicate 36.3011373832293
Condition 3: 24 Hour
Replicate 15.0922194623344
Replicate 24.0963308085628
Replicate 34.5161093022674


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_425274.p1 GENE.S_Transcript_425274~~S_Transcript_425274.p1 ORF type:complete len:592 (+),score=28.42,RPE65|PF03055.11|2.8e-100 S_Transcript_425274:155-1930(+)
ATGAGCTCTCTTACGTTGAGTAATTGGGCCACACCGGCCCATCTCCCCTGCTGTTTAAAACCGGCGATAACCACGTCGTCATCGGCGGCGGCGGCGGTAGTAATCTCGACGAAAAAGCCCAATAATAATGCCTCCCACATTTATTGTGCTCTCCAGTCATCACCTTCCCTTCTCAATTTCCCTACCACCAGTGAAAATAATCACCCTCATCAATCTCACTTGAATTTCTTCCAGAAGGCCGCGGCAGCCGCCTTGGACATGGTGGAGGGGGCTCTACTGACCCAGGAGCGGGCCCACCCCCTTCCAAAGACGGTGGACCCGAAGGTCCAGATATCCGGGAACTTCGCCCCGGTTCCGGAGCAGCCTGTCTGCCACGGGTTATCTGTGGCAGGGACGATACCGGCTTGCATCGACGGTGTCTACGTCCGGAACGGGGCTAACCAGCTATTCAAGCCAACTTCAGGCCACCACCTATTCGACGGTGACGGCATGGTTCACGCCGTCACCATCCATAATGGAGCGGCGAGCTATGCTTGCCGCTTCACGGAGACCCGACGTCTGGCTCAAGAGCGGGAAATCGGGAAACCGATATTCCCGAAGGCCATTGGTGAACTTCACGGTCACACAGGAATCGCGAGACTGCTGTTGTTCTACACTCGTGGGCTCTTGGGCTTGCTAGACAGTGAGCAAGGCATGGGAGTAGCAAACGCCGGTCTTGTCTACTTCAACGGAAGGCTGTTGGCTATGTCTGAAGATGACATCCCATATCACGTGCACCTCACGCCGTCCGGCGACTTGAAAACGGTTGGGCGATTCGACTTCGAGGGTCAGCTCAACTCAGCCATGATAGCCCATCCGAAAATCGACCCAGTTAGTAAAGAGCTCTTCTCTCTCTCCTACGACGTCATCAAAAAACCGTATTTAAAATACTTCAAATTCTCAGCGTACGGAGAAAAGTCAGCTGACGTAGAAATTCCCTTAGAGAGACCCACAATGATGCACGATTTCGCCATAACGGAGAACTTTGTTGTGGTGCCTGACCAACAGGTGGTGTTTCGAATGGAGGAGATGGTAAAAGGTGGGTCCCCCATGGTGCATGACAAGAACAAAACGTCGCGTTTTGGGGTCCTCCCAAAGGAAGCCAAAGATGCAACAGAGATTATTTGGGTAGATTGTCCTGACACTTTCTGCTTTCATCTCTGGAACGCCTGGGAGGAGAGAGAAAATGACGAGGTTGTGGTCATTGGGTCATGTATGACACCAGCTGACTCCATCTTTAACGACACCCATGAGAGCCTTGAGTCTGTTTTATCCGAAATCCGGCTTAATTTAAAAACCGGAAAATCAACTCGCCGGTCCATCATCAAAAACCCGGATGAACAGGTTAATCTCGAGGCAGGTATGGTGAATAAGAATCTACTTGGGAGGAAAACCCGGTTCGCTTATTTGGCAATTGCTGAGCCGTGGCCTAAGGTGTCCGGTTTTGCCAAGGTGGATTTGGAAACTGGTGAGGTAAGGAAGTTTTTTTACGGCGGTGAAAAGTACGGCGGTGAACCTATGTTTTTACCGCGACATAATAATGTAAGTGAAAGTGAAAGTGAATATGATGGATATATTATGGCATTTGTTCATGATGAGAAGGCTTGGAAGTCAGAATTCGTGATCGTAAATGCAATCACTATGGAAATTGAAGCCACCGTCAAGCTACCTTCAAGAGTACCATATGGGTTTCATGGTACCTTTGTGAGGAACGAGGATCTAAGACATCAAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_425274.p1 GENE.S_Transcript_425274~~S_Transcript_425274.p1 ORF type:complete len:592 (+),score=28.42,RPE65|PF03055.11|2.8e-100 S_Transcript_425274:155-1930(+)
MSSLTLSNWATPAHLPCCLKPAITTSSSAAAAVVISTKKPNNNASHIYCALQSSPSLLNFPTTSENNHPHQSHLNFFQKAAAAALDMVEGALLTQERAHPLPKTVDPKVQISGNFAPVPEQPVCHGLSVAGTIPACIDGVYVRNGANQLFKPTSGHHLFDGDGMVHAVTIHNGAASYACRFTETRRLAQEREIGKPIFPKAIGELHGHTGIARLLLFYTRGLLGLLDSEQGMGVANAGLVYFNGRLLAMSEDDIPYHVHLTPSGDLKTVGRFDFEGQLNSAMIAHPKIDPVSKELFSLSYDVIKKPYLKYFKFSAYGEKSADVEIPLERPTMMHDFAITENFVVVPDQQVVFRMEEMVKGGSPMVHDKNKTSRFGVLPKEAKDATEIIWVDCPDTFCFHLWNAWEERENDEVVVIGSCMTPADSIFNDTHESLESVLSEIRLNLKTGKSTRRSIIKNPDEQVNLEAGMVNKNLLGRKTRFAYLAIAEPWPKVSGFAKVDLETGEVRKFFYGGEKYGGEPMFLPRHNNVSESESEYDGYIMAFVHDEKAWKSEFVIVNAITMEIEATVKLPSRVPYGFHGTFVRNEDLRHQT*

Click here to download the sequence:
Link to NCBI Protein BLAST