Transcript Information: S_Transcript_425978.p1


Annotated TAIR IDAT5G35740.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13910572-13911095 | Reverse length=119
E-Value8.5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.502077039205
Replicate 21.5085668073514
Replicate 30.31526044587351
Condition 2: 8 Hour
Replicate 10.72907317323532
Replicate 20.57363714460838
Replicate 30.72874692666603
Condition 3: 24 Hour
Replicate 10
Replicate 20.38741558250167
Replicate 30.43114605820711


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_425978.p1 GENE.S_Transcript_425978~~S_Transcript_425978.p1 ORF type:complete len:117 (+),score=29.58,X8|PF07983.9|1.8e-22 S_Transcript_425978:361-711(+)
ATGTTGCACAGGCAAAGGGCTTTACTCGCTCTACTCTTGTTGGTGGTGATCTCACTCAAATCTGAGGCAGAGCTGGAAGAGTGGTGTGTAGTGGATGAGCAGACTCCAGAAGACGAGCTGCAGAGGGCACTAGATTGGGCTTGCGGAAAAGGAAGAGCTGATTGCAGAAAGATTCAGCCAAACCAGCCTTGTTACCTTCCAAACACAGTCAAGGATCATGCTGCTTATGCCTTCAATAGCTACTATCAAAAGTTCAAGCACAAGGGTGGTAGCTGCTTCTTCAACTCCGCTGCTATGATCACTGGTCTTGATCCCAGTGATGGTGCATGCAAGTATGAATTTATCCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_425978.p1 GENE.S_Transcript_425978~~S_Transcript_425978.p1 ORF type:complete len:117 (+),score=29.58,X8|PF07983.9|1.8e-22 S_Transcript_425978:361-711(+)
MLHRQRALLALLLLVVISLKSEAELEEWCVVDEQTPEDELQRALDWACGKGRADCRKIQPNQPCYLPNTVKDHAAYAFNSYYQKFKHKGGSCFFNSAAMITGLDPSDGACKYEFIP*

Click here to download the sequence:
Link to NCBI Protein BLAST