Transcript Information: S_Transcript_42603.p1


Annotated TAIR IDAT5G13310.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4263561-4264989 | Forward length=370
E-Value1.6E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.573915669335
Replicate 210.982147480638
Replicate 311.320875944174
Condition 2: 8 Hour
Replicate 118.564513892147
Replicate 213.832593913402
Replicate 314.08368502472
Condition 3: 24 Hour
Replicate 18.4356358122161
Replicate 28.549518206256
Replicate 310.021258714533


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42603.p1 GENE.S_Transcript_42603~~S_Transcript_42603.p1 ORF type:complete len:448 (+),score=126.79,TSSC4|PF15264.2|1.2e+04,TSSC4|PF15264.2|2e-10 S_Transcript_42603:71-1345(+)
ATGGACGAGGGATCGTTCTCAGAGAGAGTAAAGAAGACCTTCGGATCTTTATTCGCATCTCTAGAACCTTCTCCAGCTTCTCTGTCAAACCCATTATGGTCACTATCAGGGGTTCAGGCTGAGAAGCGTGAATGGCGGCGTGACAAGGACACCTCTGCTAGAGATTCCAACCCTTGTTCTTCTTCCTTTGATGATTTTCTCTCTCAGGCTCGTAAAGAGTCCCGTAATAATATCAAGAATTACCAAAAGGAGCTCCAGGATGAACTTGATGATGATGATGGGGATAAGGGGCGTGTGGATTTGGATGATTGGGATGTTCGATCTTCTATCGGTTTGGATTCCACTCTTGACAATGAGGAAGAAGAAGATACCTTTGACAAAGTTGCCACAGGCAGGGAGAATGCTGGTGACAGATTGTATATGAGCGACATTGCTGAGAACAATGATTCCCCTATGAGCTCCCATGATGACCTTGCAAACACTATTGGGATCAAGAAAAGGGATCCCCGTGCTAATCGCCAGGCTGCAAGGATTAGGCTGAAAGAAGATGATGCAGAAGCTGCAAAGCAGGCAGACCAATATAAGAAAGGTGGGAAGGCCCCTGCCTCAACCGCTGAAACAGAAACTTCTGCATCAGCAGAATATTGTGACAAGTTGAAGCCTATACTGAAAAGAAAGGAGCATGAAATGACATCAAAACCGGCAAAGCGTGTTAGGTTTGACCCTTTATGCATAAGTAGTGTTGGCAGTGCAAGTGAAATTCTTATGAGTAATACAACTTCAGCAGAAGCTAGAGACCAAGATACAGAACCAGTGTTGGATGAGAAAGTGTCTCGGGTTCCTGATTATATACGAAATCCCTCCAAATACAAGTGCTACAGTCTTGATTCCACTGATGACATGAATGATAAATCAAATAGTGCAGCCCTCTTGGATCACCTTGAGATGGTGAAGAGGTCAAAGAATGAGGGGTCAGGATCTGAGCAGGCAGATGGTCCCATTGATCTCCCCAAATCTATAACTTTTATACCAAAGAAAAAGTCAGATACTGCTAAACTAGATGGTGTTCATAATGAGTCCATTGAAGACAGAAGCACTCATATGAAAACAATCTCACTAGTTGGGGAAGACCAAGTGACTGAAATTGGTGACATGGAAGTTGATGAACCTGAATCAAGTACAGGGCCTGATATGTGCACCACCTTCAGGAAACAGGGTCGTCAGTATCGATCAAAGTCCAGGGAAGATTCACCTGCTGAAATAGGTCATGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42603.p1 GENE.S_Transcript_42603~~S_Transcript_42603.p1 ORF type:complete len:448 (+),score=126.79,TSSC4|PF15264.2|1.2e+04,TSSC4|PF15264.2|2e-10 S_Transcript_42603:71-1345(+)
MDEGSFSERVKKTFGSLFASLEPSPASLSNPLWSLSGVQAEKREWRRDKDTSARDSNPCSSSFDDFLSQARKESRNNIKNYQKELQDELDDDDGDKGRVDLDDWDVRSSIGLDSTLDNEEEEDTFDKVATGRENAGDRLYMSDIAENNDSPMSSHDDLANTIGIKKRDPRANRQAARIRLKEDDAEAAKQADQYKKGGKAPASTAETETSASAEYCDKLKPILKRKEHEMTSKPAKRVRFDPLCISSVGSASEILMSNTTSAEARDQDTEPVLDEKVSRVPDYIRNPSKYKCYSLDSTDDMNDKSNSAALLDHLEMVKRSKNEGSGSEQADGPIDLPKSITFIPKKKSDTAKLDGVHNESIEDRSTHMKTISLVGEDQVTEIGDMEVDEPESSTGPDMCTTFRKQGRQYRSKSREDSPAEIGHD*

Click here to download the sequence:
Link to NCBI Protein BLAST