Transcript Information: S_Transcript_42648.p1


Annotated TAIR IDAT1G08200.1
Annotated Gene NameUDP-D-apiose/UDP-D-xylose synthase 2
Annotated Gene Symbol(s)AXS2
Annotation TypeOrtholog
Chromosome Positionchr1:2574259-2576609 | Reverse length=389
E-Value3.1E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 175.860771562138
Replicate 274.206031888033
Replicate 364.026715218067
Condition 2: 8 Hour
Replicate 160.513543142174
Replicate 257.774722518057
Replicate 361.914846007252
Condition 3: 24 Hour
Replicate 151.121531467679
Replicate 254.206229749614
Replicate 357.919694755048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42648.p1 GENE.S_Transcript_42648~~S_Transcript_42648.p1 ORF type:complete len:388 (+),score=71.14,Epimerase|PF01370.17|6.2e-59,Epimerase|PF01370.17|5.6e+03,GDP_Man_Dehyd|PF16363.1|7.5e-30,Polysacc_synt_2|PF02719.11|1.3e-05,Polysacc_synt_2|PF02719.11|1.3,3Beta_HSD|PF01073.15|3.4e-06,Sacchrp_dh_NADP|PF03435.14|4.2e-05,Sacchrp_dh_NADP|PF03435.14|1.3e+03 S_Transcript_42648:207-1370(+)
ATGGCGTCGACGAGAGTAGATCTTGACGGAAATCCGATAAAGCCGATAACGATATGCATGATCGGAGCAGGTGGATTCATCGGTTCACACCTATGCGAGAAGATAATGTCGGAAACTCCTCACAAGGTTCTTGCTGTTGATGTTTACAATGACAAGATCAAGCATCTTCTCGAACCTTCTTCTCTTCCTTGGGCTGATCGTATTCAGTTTCACCGTATCAACATCAAGCATGATTCTCGCCTTGAAGGCCTCATCAAGATGGCAGATCTGACGATTAATTTGGCGGCGATCTGTACTCCTGCTGATTATAACACTCGACCTCTTGACACCATTTACAGCAATTTCATCGATGCGTTGCCAGTGGTCAAGTACTGTTCGGAGAACAACAAGCGTCTCATTCACTTCTCGACTTGTGAAGTGTATGGGAAAACTATTGGTAGCTTTCTTCCGAAGGACAGTCCCTTGCGTCAGGATCCTGCATACTATGTTCTGAAAGAAGATACTTCCCCCTGCATCTTTGGTTCCATTGAGAAGCAGAGATGGTCATATGCATGTGCAAAGCAGTTGATTGAAAGGCTCATATATGCCGAGGGTGCTGAAAATGGTCTTGAGTTTACCATTGTGAGACCTTTCAACTGGATAGGCCCCAGGATGGATTTCATCCCTGGTATTGATGGTCCTAGTGAGGGTGTCCCAAGAGTTTTAGCTTGTTTCAGCAATAACCTGCTGCGTCATGAGCCACTCAAGCTTGTCGATGGTGGTCAATCCCAGAGAACCTTTATTTACATCAAGGATGCCATTGAGGCTGTACTGTTGATGATTGAAAATCCTGGCAGAGCAAATGGTCACATCTTCAACGTTGGTAACCCTAACAATGAAGTTACTGTCAGACAGCTTGCTGAGATGATGGTTCAGGTATACTCAGAGGTTAGTGGAGAGTCACCTTTGGAAAAACCAACCATTGATGTAAGCTCCAAAGAGTTCTATGGTGAAGGGTATGACGACAGTGACAAGAGAATTCCAGACATGACCATCATTAACAGACAACTTGGCTGGAACCCTAAAACATCTCTCTGGGACTTGCTCGAATCAACTCTCACATACCAACACAGGACATATGCAGAGGCCGTGAAGCAGACCATGTCAAAGCCAGTTGCAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42648.p1 GENE.S_Transcript_42648~~S_Transcript_42648.p1 ORF type:complete len:388 (+),score=71.14,Epimerase|PF01370.17|6.2e-59,Epimerase|PF01370.17|5.6e+03,GDP_Man_Dehyd|PF16363.1|7.5e-30,Polysacc_synt_2|PF02719.11|1.3e-05,Polysacc_synt_2|PF02719.11|1.3,3Beta_HSD|PF01073.15|3.4e-06,Sacchrp_dh_NADP|PF03435.14|4.2e-05,Sacchrp_dh_NADP|PF03435.14|1.3e+03 S_Transcript_42648:207-1370(+)
MASTRVDLDGNPIKPITICMIGAGGFIGSHLCEKIMSETPHKVLAVDVYNDKIKHLLEPSSLPWADRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDTSPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPGRANGHIFNVGNPNNEVTVRQLAEMMVQVYSEVSGESPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKQTMSKPVAS*

Click here to download the sequence:
Link to NCBI Protein BLAST