Transcript Information: S_Transcript_426513.p1


Annotated TAIR IDAT4G21980.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)APG8A, ATG8A
Annotation TypeOrtholog
Chromosome Positionchr4:11655868-11656809 | Forward length=137
E-Value1.3E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26349506173446
Replicate 20.21844346096549
Replicate 30.36520269472476
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.44878834804648
Replicate 30.24972321193184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_426513.p1 GENE.S_Transcript_426513~~S_Transcript_426513.p1 ORF type:5prime_partial len:101 (+),score=0.06,Atg8|PF02991.12|2e-44,APG12|PF04110.9|1.2e-06 S_Transcript_426513:2-304(+)
GAAAAGTTCACGGATCGCATACCGGTAATAGTTGAGAAGGCGCCCCGGAGCGACATCCCCGATATCGATAGGAACAAGTACCTAGTGCCAGCCGATCTCAGTGTAGGTCAATTCGTGTATGTGATCCGCAAACGGATACAACTGCCCTCCGAGAAGGCGATCTTCATCTTTGTGAAAAACACGCTGCCGCCAATTGCTGCCATGATGGCAACCGTGTACGAGGAGCACAAAGACGAAGATGGCTTTCTTTATATCACCTACAGTGGTGAGAACACATTTGGGGGCTGTGTGGCCATGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_426513.p1 GENE.S_Transcript_426513~~S_Transcript_426513.p1 ORF type:5prime_partial len:101 (+),score=0.06,Atg8|PF02991.12|2e-44,APG12|PF04110.9|1.2e-06 S_Transcript_426513:2-304(+)
EKFTDRIPVIVEKAPRSDIPDIDRNKYLVPADLSVGQFVYVIRKRIQLPSEKAIFIFVKNTLPPIAAMMATVYEEHKDEDGFLYITYSGENTFGGCVAMH*

Click here to download the sequence:
Link to NCBI Protein BLAST