Transcript Information: S_Transcript_42682.p1


Annotated TAIR IDAT1G06530.1
Annotated Gene NameTropomyosin-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2001625-2002596 | Forward length=323
E-Value6.7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1113.53830704476
Replicate 2106.33220174317
Replicate 3100.94396968835
Condition 2: 8 Hour
Replicate 1100.69622173416
Replicate 2101.20283008918
Replicate 389.299527244537
Condition 3: 24 Hour
Replicate 193.325478581118
Replicate 2101.24957242688
Replicate 3101.93287768458


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42682.p1 GENE.S_Transcript_42682~~S_Transcript_42682.p1 ORF type:5prime_partial len:338 (+),score=40.99,ATG16|PF08614.7|0.00022,ATG16|PF08614.7|0.0041,DUF3450|PF11932.4|0.043,DUF3450|PF11932.4|0.00088 S_Transcript_42682:2-1015(+)
TTGGGAGAAAATTTGAAAGGGTACCAAAAAGATCTTTTTTTAAAACAAAAAAGGAAAACGATTAGCCCTCCACTCTCCACATTCCCACCACCACTCGCATTACATTTTTATGTCTTCCATTTATCGGTCCTAAAACCCTACTCATTTCATTTCTGCGCACCCCCACACAAACCGAAACAAACAAAACCTTTCATTTCTACCTTTCCAAAATCAATGGCGGACACCGAAGCTCTCACCAACGGCGTTCATGTCGACTCTGACTCCTCCGATCATCCTTCTTCCAAGAAAATCGCCATCGAAGATGACAACTCCAACTCCAACGCTAACGCGAACGCTGACGACATCGACGAATTGAACCGGAGGATCGAAGCACTGGAGCGGGAGAAAACCGAACTGGAGAATACGAATACTGAATCGGCGAGCCGAATCGGTGAGTTGAAGGCCGAGTTGGACGCGCTCAAGAGAGAGAAGGCGGCCGAGTCGATTCGGTCCGAGTCAGAGAGCAAAACGACGGAAGCAATAGCGAAGCGAGCCTCGGAGCTCGAAGGAGAAGTCGCTCGACTCCAGCACGACCTAATCACCGCCATGAACGACGGCGAAGAGGCGAGCCGCGCAGCTCAGGAGCTCCGATCGAAGATCGGAGAGCTGGAGAGCGAAATCGGTGACCTGAGGAGAGAGAAAAAGGCGGCTGAGGAATCGGTTTCGGAGCTCCAGTCGCAGTTGAACGAGTCGAAGATGAAGGTGAAGTCAATGGAGGAGAAGATGGAGGAATTAGTGAAGAAATCGGAGGAATCGGACCAGTTGGTTGGTGGATTAGTGGATAAGATTGCTCAGAAGGAGAGAGAAGCTGTTGTTATTGTTGAAGATGAGGTTGTTGATGAGCAAAAAAGTGATAACAATGGAGGTTTCAAGGGTTTCGGGTCGCAATTGCCGCTAATTGGAGCTGTTTCTGCTGGTGCTTTTGTTGCTGTCATGGCTGTTTGCTATGTTAGGTACAATAGAACAGGTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42682.p1 GENE.S_Transcript_42682~~S_Transcript_42682.p1 ORF type:5prime_partial len:338 (+),score=40.99,ATG16|PF08614.7|0.00022,ATG16|PF08614.7|0.0041,DUF3450|PF11932.4|0.043,DUF3450|PF11932.4|0.00088 S_Transcript_42682:2-1015(+)
LGENLKGYQKDLFLKQKRKTISPPLSTFPPPLALHFYVFHLSVLKPYSFHFCAPPHKPKQTKPFISTFPKSMADTEALTNGVHVDSDSSDHPSSKKIAIEDDNSNSNANANADDIDELNRRIEALEREKTELENTNTESASRIGELKAELDALKREKAAESIRSESESKTTEAIAKRASELEGEVARLQHDLITAMNDGEEASRAAQELRSKIGELESEIGDLRREKKAAEESVSELQSQLNESKMKVKSMEEKMEELVKKSEESDQLVGGLVDKIAQKEREAVVIVEDEVVDEQKSDNNGGFKGFGSQLPLIGAVSAGAFVAVMAVCYVRYNRTGN*

Click here to download the sequence:
Link to NCBI Protein BLAST