Transcript Information: S_Transcript_42685.p1


Annotated TAIR IDAT1G61900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast hits to 65 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22882508-22884722 | Reverse length=433
E-Value4E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97026567003262
Replicate 20.57455181139361
Replicate 31.8250624249396
Condition 2: 8 Hour
Replicate 10.66641844741041
Replicate 20.81564031499003
Replicate 31.2212204357021
Condition 3: 24 Hour
Replicate 10.62576489165765
Replicate 20.4721627411739
Replicate 30.85387129496487


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42685.p1 GENE.S_Transcript_42685~~S_Transcript_42685.p1 ORF type:complete len:384 (+),score=49.46 S_Transcript_42685:308-1459(+)
ATGAAACAAGGGTTATTGCTGACTAAAATCATCAAGTTTCAATTTTTAACCTCACTTCTTCTTTTCTTATATATTGATGACCTATGCTGCAGCTCTGTTAATGGTTACAAAGGTCCTGTTCCAGATGGGTTCATCCCAATGTCACCAAAAGGGGCTCCTCAGCCTTTTCTTCCTTTTCTTGCACCTTCACCTTTGACTCCGTTTACCAATAATACTGTTCCTAAATTATCAGGAGCATGTCCTTTTAACTTCACTGGTGCAGAAAGTATAATGAGGGTAACATCGACTGATTGTTTCACTGCCTTTGCACCTTCGCTGGCTAATGTAGTATGCTGCCCGCAATTGCAGGCTACCTTAGTTATTCTTATAGGTCAGTCCAGTAAAGATACCACATTGCTTGCTCTGAATAAGACCCTTGCAAGACAATGCCTATCGGATGTTGAACAAGTATTGGTGAGTCAGGGTGCAAACGACAGTCTCCCCCAAATGTGTCAAGTTCGTCCGTCAAATCTCACTGAAGGATCTTGTCCTGTCAAAGATGTGAGTGAATTTGAGATGACAGTGGATACCTCTAAGCTTCTGGCTGCCTGTGAAAAGATTGATGTTGTGAATGAATGTTGTACTCAAACTTGTCAGAATGCGATATCAGAAGCTGCACAAAAAATTACCTCCAAAAACAATGAACTGATTAATGTCCCTCAACTTTCTAGCACAGTTGAAGATTGTAAAAGCATTGTACTCCGTTGGCTGGCCAGTAAACTTGAGCCTTCCCGTGCAAAAGAAGTTCTAAGAGGGCTGTTGAATTGTAAAATCAACAAAGTGTGTCCTTTGGCCTTCCCTGACTCAAAACATGTAGTTAAGGAGTGTGCAAATGTGGTAAGTGATAAAACAGCATGCTGCCTTGCGATGGAAAGCTACTTGAGTCACTTGCAAAACCAGAGCTTCACCACAAACTTGCAAGCGCTGAATTGTGCTGCTTCACTGGGATTGAGGTTGCAAAGGGAAAATGTAAGCACAAATGTTTACGACCTTTGTCATGTGAGTCTCAAGGAGTTTTCTCTGCGAGGTACTTCTTCATGCTTTGCTTTTTCCTTAATGTTTTACCTATTCTTACAAGCATTTTCCTTGGAAATTATGTACACAAAATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42685.p1 GENE.S_Transcript_42685~~S_Transcript_42685.p1 ORF type:complete len:384 (+),score=49.46 S_Transcript_42685:308-1459(+)
MKQGLLLTKIIKFQFLTSLLLFLYIDDLCCSSVNGYKGPVPDGFIPMSPKGAPQPFLPFLAPSPLTPFTNNTVPKLSGACPFNFTGAESIMRVTSTDCFTAFAPSLANVVCCPQLQATLVILIGQSSKDTTLLALNKTLARQCLSDVEQVLVSQGANDSLPQMCQVRPSNLTEGSCPVKDVSEFEMTVDTSKLLAACEKIDVVNECCTQTCQNAISEAAQKITSKNNELINVPQLSSTVEDCKSIVLRWLASKLEPSRAKEVLRGLLNCKINKVCPLAFPDSKHVVKECANVVSDKTACCLAMESYLSHLQNQSFTTNLQALNCAASLGLRLQRENVSTNVYDLCHVSLKEFSLRGTSSCFAFSLMFYLFLQAFSLEIMYTKC*

Click here to download the sequence:
Link to NCBI Protein BLAST