Transcript Information: S_Transcript_4271.p1


Annotated TAIR IDAT5G55570.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22514587-22515260 | Reverse length=143
E-Value7E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9091944026061
Replicate 22.1420184036422
Replicate 31.0743341407923
Condition 2: 8 Hour
Replicate 12.0704262443818
Replicate 21.3032144838676
Replicate 31.2416998604844
Condition 3: 24 Hour
Replicate 12.969207464741
Replicate 21.5402590391692
Replicate 32.9384906103048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4271.p1 GENE.S_Transcript_4271~~S_Transcript_4271.p1 ORF type:5prime_partial len:103 (+),score=17.88 S_Transcript_4271:3-311(+)
TTGCCAATTATCCATTCCCATAATTTCCAAGCTCTTAAACCAATTGTAAAGTTAAGGAGCAACACCAACCAATATTCCTTGAGAATTAGACAATTGGATGTGAAAGTGAAAGTGCTAAATGATGTTTCAACAGTAGATACTGCTCAAGCTCAAGTCACCTGGGAAATCATTGTTGGTGCTCTAGCTGGTGTAACGCCTTTTATTATTGCGGGAATTGAGTTCAGCAAAAGGATTGGGGGTTTCTTCCATGGCAGTCTTGGAAAAGATTCTTTTCTGGATGAAATTGCGTATGGAGACTTCTTGATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4271.p1 GENE.S_Transcript_4271~~S_Transcript_4271.p1 ORF type:5prime_partial len:103 (+),score=17.88 S_Transcript_4271:3-311(+)
LPIIHSHNFQALKPIVKLRSNTNQYSLRIRQLDVKVKVLNDVSTVDTAQAQVTWEIIVGALAGVTPFIIAGIEFSKRIGGFFHGSLGKDSFLDEIAYGDFLI*

Click here to download the sequence:
Link to NCBI Protein BLAST